| Entry |
|
|---|
| Symbol |
rpoC
|
|---|
| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
|
|---|
| KO |
|
|---|
| Organism |
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:mut00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GVT53_01705 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mut03021]
GVT53_01705 (rpoC)
03400 DNA repair and recombination proteins [BR:mut03400]
GVT53_01705 (rpoC)
Enzymes [BR:mut01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GVT53_01705 (rpoC)
Transcription machinery [BR:mut03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GVT53_01705 (rpoC)
DNA repair and recombination proteins [BR:mut03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GVT53_01705 (rpoC)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
360770..365068
|
|---|
| AA seq |
1432 aa
MARIKDNNAQKRFNKISIGLASPESILAESRGEVLKPETINYRTHKPERDGLFCERIFGP
VKDYECACGKYKRIRYRGIVCDRCGVEVTEKKVRRDRVGHINLVVPVAHIWYFRSLPNKI
GYLLGLPSKKLDMIIYYERYVVIQPGIAKGPEGEEIQKMDFLTEEEYLNILESIPTENQY
LEDSDPNKFIAKMGAECLIDILSRIDLEQLSYELRHKANTETSKQRKTEALKRLQVVEAL
RESQGNRENNPEWMIMKVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLM
EIKAPEVILRNEKRMLQEAVDSLFDNTRKASAVKTESNRPLKSLSDSLKGKQGRFRQNLL
GKRVDYSARSVIVVGPELKLYECGLPKDMAAELYKPFIIRKLIERGIVKTVKSAKKIIDK
KEPVVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIRLHPLACTAFNADFDG
DQMAVHLPLGPEAILEAQLLMLASQNILNPANGSPITVPSQDMVLGLYYMTKHKKSTPEE
PVLGEGLTFYSSEEVEIAFNEKKVSLNAGIKVRAKDFNEKGELVYQIIETTVGRVLFNTE
VPEQAGFINQVLNKKALRNIIGDILAVTDVPTTADFLDKIKAMGYDFAFKGGLSFSLGDI
IIPAEKQDMIGEANEQVDGIMMNYNMGLITNNERYNQVIDVWTSTNAMLTELAMKRIRED
KQGFNSVYMMLDSGARGSKEQIRQLTGMRGLMAKPKKSTAGGGEIIENPILSNFKEGLSI
LEYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIVNSEDCGTLRGIEVEPLKKNE
EIVETLGERILGRVSLHDVYNPLTEELILRAGQEINEVDVRRVEAAPIEKIEVRSPLTCE
APQGICSKCYGRNLATNKMVQRGEAVGVVAAQSIGEPGTQLTLRTFHVGGIAGNISEDNK
LESKFDGIAEIEDLRVVEGQAGDGSKTNIVISRTSEVKIVDPKTGITLSTSNIPYGSQLF
VKDGEKITKGTVICEWDPYNGVIVSEFSGQIAYENIEQGVTYQVEIDEQTGFQEKVISES
RNKKLIPTLLIQNSKGETLRSYNLPVGSHLMINDGEKVKEGKILVKIPRKSAKAGDITGG
LPRVTELFEARNPSNPAVVSEIDGVVSFGKIKRGNREIIIESKTGDIKKYLVKLSNQILV
QENDYVRAGMPLSDGSITPEDILAIKGPSAVQQYLVNEVQEVYRLQGVKINDKHFEVVVR
QMMRKVKIQDPGDTIFLENQLVHKDDFINENDEIFGKKVVEDAGDSERLKPGQILTVREL
RDENSILRREDKTLVSARDAVAATATPILQGITRASLQTKSFISAASFQETTKVLNEAAV
SGKVDTLEGLKENVIVGHKIPAGTGMRDYDSIIVGSKEEYDEIMARKEEFKF |
|---|
| NT seq |
4299 nt +upstreamnt +downstreamnt
atggctagaataaaagataataacgcacaaaaaaggttcaacaaaatttccattggattg
gcctcgccagagtcgattttggcagagtcccgcggagaagtgttgaagcctgaaaccatt
aactatagaacgcacaaaccagagcgtgatggattgttctgcgagcgtatttttggtcct
gtaaaggattatgagtgtgcctgtggtaaatacaagagaatccgttaccgtggaatcgtt
tgtgaccgttgtggtgttgaagtgacggagaagaaggtacgtagagaccgtgtgggccac
attaatcttgtggttcccgtagcgcacatctggtacttccgctcgttgccaaacaagata
ggttaccttttgggattgccttccaaaaagttggatatgatcatctactacgaaaggtat
gtggttatacagccaggtattgccaaaggtccagaaggtgaggaaatccaaaaaatggat
ttcttgaccgaagaggaatacctgaacattttggaatccattcctaccgagaaccaatac
ttggaggatagcgaccccaacaagttcatcgccaaaatgggtgccgagtgtttgatcgac
attttgtccagaatcgatttggaacaattgtcttacgaacttcgtcacaaggcaaacaca
gagacttcaaaacaacgtaagaccgaagccttgaagcgtcttcaagtagtggaggctttg
cgtgagtcgcaaggaaacagggagaacaacccggagtggatgatcatgaaggtgattccc
gtgattccaccagaattgcgtccgttggtgccgttggatggtggtcgttttgcgacttcc
gatttgaacgacctgtatcgtagggtaattatccgtaacaaccgtttgaagcgtttgatg
gaaatcaaggcaccagaagtgatcttgaggaacgaaaaacgtatgcttcaagaagcggta
gattcccttttcgataacacaagaaaagcatctgcggtaaaaacagaatcaaacagacca
ttgaaatccctttcagattccttgaaaggtaaacaaggccgtttccgtcaaaaccttttg
ggtaaacgtgtggattactccgcccgttccgtaatcgtcgttggaccggaattgaaattg
tacgaatgtggtcttccaaaagatatggcggccgaactttacaaaccgttcatcatccgt
aagttgattgaaagaggtattgtaaagaccgttaaatctgccaaaaagattatagacaag
aaagagcccgtagtatgggacattcttgaaaacgtccttaaaggacaccctgtattgttg
aaccgtgcccccacattgcacagattgggtatccaagcgttccagcctaaacttatcgaa
ggtaaggctatccgtttgcacccgttggcgtgtaccgcatttaacgcggattttgatggg
gatcagatggcagttcacttgccattggggccagaggccattttggaagcgcaactattg
atgttggcttcgcagaacatccttaaccctgccaatggttctccgattaccgtcccgtcc
caggatatggttttgggattgtactatatgaccaagcacaaaaaatccactccagaagag
cctgtattgggcgaaggattgaccttctattcttctgaagaggttgaaattgccttcaac
gagaaaaaagtttcgcttaatgccggaatcaaggtaagggccaaggactttaacgaaaaa
ggtgaattggtatatcaaatcattgaaaccacggtaggtcgtgtattgttcaacacggaa
gtgccggaacaagcaggattcatcaaccaagtattgaacaagaaggcccttaggaacatt
attggggacattcttgcggtgaccgatgtacctacaacggccgatttcttggataagatc
aaggccatgggatacgatttcgcctttaaaggtggattgtcctttagtttgggtgatatt
atcatccctgccgaaaagcaggatatgatcggcgaggcaaacgagcaggtcgatggtatt
atgatgaactataacatgggtctgatcaccaacaacgagcgttacaaccaggttatcgat
gtttggacatctaccaacgccatgttgaccgaattggcaatgaagcgaatccgtgaggat
aagcaaggattcaactccgtatatatgatgttggattctggtgcgaggggttccaaagag
cagattcgtcagttgaccggtatgcgtggattgatggccaagccgaaaaaatccacagct
ggtggtggtgaaattatcgagaacccgattctttccaactttaaggagggactttcgatc
ttggaatactttatctctacccacggtgcgcgtaaaggtcttgcggataccgctttgaaa
acggcggatgcgggatacttgaccagacgtttggtggacgtttcacaagatgtgatcgtg
aatagcgaggattgtggaactttgagaggtatcgaggtagaaccattgaagaaaaatgag
gagattgttgaaaccctgggtgaaagaatcttgggcagggtatcgttgcacgatgtgtac
aacccattgaccgaagaattgatcctaagagcaggccaagaaatcaacgaggtcgatgtg
agaagggtagaggcagctccaattgaaaagatagaagtaagatcaccgttgacctgtgag
gctcctcagggaatctgttccaagtgttacggtagaaaccttgctaccaataaaatggta
caacgaggtgaagctgttggtgttgtggcggcacaatccattggtgagccaggtacacag
ctaacgttgcgtaccttccacgtgggtggtattgcaggtaacatttccgaggacaacaag
ttggaatccaaattcgacggtatcgccgaaattgaggacttgcgagttgtagaaggacag
gccggcgatggaagtaaaacgaatatcgtgatttccagaacttcggaagtgaagatcgtt
gatccaaaaacaggaatcacgttaagtaccagcaacattccttatggatctcaattgttc
gtgaaggatggagaaaaaatcaccaaaggaaccgtaatctgtgaatgggatccctataat
ggtgtaatcgtttctgagttctccggacagattgcttacgagaatattgagcaaggggtt
acttaccaagtggaaatcgatgaacagaccggtttccaagaaaaagtaatctccgaatca
aggaacaagaagttgataccaacgttgttgatacagaacagtaaaggtgaaaccttacgt
tcctataacttgccagttggttcccacttgatgatcaatgatggtgagaaggtaaaagaa
ggtaagatcttggtgaaaatccctcgtaaatctgccaaggcaggggatattaccggtggt
cttccaagggtaacagagcttttcgaagcccgtaacccatccaacccggccgttgtatct
gagattgacggtgtggtatccttcggtaagatcaagcgtggtaaccgtgagatcatcatc
gaatccaagacaggcgatatcaaaaagtacttggtcaaattgtccaaccagatattggtt
caggaaaacgactacgtacgtgcaggtatgccattgtccgatggttccataacaccggaa
gatatcttggccatcaaaggaccatcagcagtacagcaatacttggtgaacgaggtacaa
gaagtataccgtttgcaaggggtgaagatcaacgataagcactttgaggttgttgtaaga
cagatgatgcgtaaagtgaagatccaagatccaggagatactattttcttggagaaccaa
ttggtgcacaaagatgactttatcaacgagaacgatgagattttcggtaaaaaagttgtt
gaggacgccggtgattccgaaaggttgaaaccaggacagattttgacggtacgtgagcta
agggacgaaaactccattcttagaagagaggacaagaccttggtatcggcaagggatgcc
gtggcagcaaccgctacaccgatcttgcaaggtattacaagagcttcgttgcagacaaaa
tcatttatctctgcagcatcgttccaagaaacgaccaaagtattgaacgaagccgctgta
agtggtaaagtggataccttggaaggattgaaggaaaacgtaattgttggacataagatt
cctgccggtaccggtatgagggattacgatagcatcattgtaggttccaaagaggaatac
gatgagatcatggcccgaaaagaggaattcaaattctaa |
|---|
