Flagellimonas oceani: GVT53_04285
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Entry
GVT53_04285 CDS
T06500
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
mut
Flagellimonas oceani
Brite
KEGG Orthology (KO) [BR:
mut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mut03000
]
GVT53_04285
Transcription factors [BR:
mut03000
]
Prokaryotic type
Helix-turn-helix
Other families
GVT53_04285
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS_9
PAS
Sigma54_activ_2
PAS_3
AAA_5
AAA
PAS_4
PAS_8
AAA_2
HTH_8
AAA_7
AAA_3
AAA_16
AAA_22
ATPase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QII43924
UniProt:
A0A6G7J025
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Position
complement(906843..908972)
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AA seq
709 aa
AA seq
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MKDKMQDALIKGQLMEKLPHEMCWLDEKGNIINANAKFRSALGYSKKECENLSISKINIT
VTPESWRKHWEEVHTNRNVRFTTIHKTKKGKFYEVEVNAQSFTYDGKKYICSILHELGET
GFYKNLIEDTQSMADLGGWELNLYDGSILATQCALTIFKAKNPEDLVPAKIIHKFKDSEK
VRSLLGQVINKGIAFEELFETNDSPPRYIRAMAKPILKGNKIYKVLGAYQDVTEFKNRES
DLGLLSTVINNAQDLIYVYNEQGDLLYYSESLIPTLGYSKEELDQMSMFDLDPAVTDEFY
NAHFDMLKAKGSHRFEWLIHRKDGTIFPVDITSSHLTYKGEDYCCSVVRDITTNKMHELQ
IYEALEEIKSLKERLEIENEYLQEEIGTKINFKNIICHSDAYKRVLVQVDQVAPTETTVL
ITGESGTGKELLARAIHNNSKRKERPLIKINCAVLPKDLIESELFGHKKGAFTGAVADKV
GKFTLADGGTIFLDEIGELPLELQPKLLRVIQEMEFDELGSTKTKKVDVRVIAATNRDLK
EMIRDGRFREDLYYRLNVFPIHNIPLRARKEDIPVLTQFFLEKYAMKAGKVFNRVSKDTI
EALLNYNFPGNIRELENMIERAVIVENGPTLKPGNWIPHKDIPASSVGFKSFESIQKDYI
IEVLDHTNWRVSGPSGAAKILKMKDKTLFAKMKRLGIEKVVSLKQRNNL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacaagatgcaagatgccctgatcaaagggcagttaatggaaaaactgccccat
gaaatgtgctggctggatgaaaagggcaacatcatcaacgccaatgccaagtttcgcagt
gcattgggctatagtaaaaaagaatgcgaaaacttatcaatttcgaaaatcaacattacc
gtaactcccgaaagctggcgaaaacattgggaggaggttcacacgaaccgtaatgtacgt
ttcacgacgatccacaagaccaaaaaagggaaattctatgaagtcgaggtcaatgcccag
agctttacctatgatggaaaaaaatacatatgttccatcttacatgaactgggagagacc
ggtttttacaaaaatctgatcgaggacacccagtccatggcggatttgggcgggtgggag
ctcaacttatatgatgggtccatcttggccacgcaatgtgccctgacaatattcaaggcc
aagaacccagaagacctggtccctgccaagatcatccataaattcaaggacagtgaaaag
gtcaggtctttacttgggcaggtcatcaacaaaggaattgcttttgaagagctattcgaa
accaacgattcccctccccgttatatcagggccatggccaaacccatcttaaaaggaaat
aaaatctataaggttcttggcgcctatcaagatgtgacagaattcaagaacagggaaagt
gacctgggccttttgagcaccgtgatcaacaatgcccaagatttgatctatgtatacaat
gaacaaggggatttattatactatagcgaatccttgattcccacgttgggctatagcaag
gaggaactggatcaaatgagcatgttcgatctagatcctgccgtcacggatgaattttac
aatgcgcattttgatatgttaaaggccaaaggctcgcatcggttcgaatggttgatccac
agaaaggacgggaccattttccctgtggacatcacttcaagtcatttgacctataaagga
gaggattactgttgctcagtggtgagggacattaccaccaacaaaatgcacgaacttcaa
atttatgaagctttggaagaaatcaaatccttgaaagagcgcttggagatcgaaaacgaa
tatttgcaggaggaaatcggcactaaaataaatttcaaaaacatcatatgtcatagtgat
gcctataagcgtgtacttgttcaagtcgatcaagtggcccctacggaaacaacggtattg
attaccggtgaatccggaacgggcaaggaattattggcaagggccatacacaacaatagt
aaaagaaaagaacgtcccctgatcaagatcaattgtgcagtccttcccaaggacctcatc
gagagtgaactgttcgggcataaaaaaggtgcctttacaggggctgttgccgacaaggtg
ggcaagttcacccttgcggacgggggaaccatcttcctcgatgaaatcggtgaattgcct
ttggaactgcaacccaaactactgcgagtaatacaggaaatggagtttgatgagttgggc
agcaccaaaacaaaaaaagtcgatgtacgtgtcattgccgccaccaatcgggatttgaag
gaaatgattcgtgatggcaggttccgggaggatctctattaccgactgaatgtatttccc
atacacaatatccccttgcgggcccggaaggaagacattccggtgctgacacagtttttt
ttggagaaatatgcaatgaaggccggcaaagtctttaatcgtgtatcaaaggatacgata
gaagccctgttaaattataactttccagggaacatcagggaattggaaaatatgatcgag
cgtgcggtcatcgtggaaaacggcccgaccctaaagcccggaaattggataccgcataag
gatattccagcatcgagcgtaggctttaaatcctttgagtccattcaaaaagattacatc
atcgaagtcctcgaccataccaattggcgggtcagtggtcccagtggagcggccaagata
ttaaagatgaaggacaagaccctttttgccaaaatgaagcgattgggcatcgaaaaagta
gtcagtctaaagcaaagaaacaacttgtga
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