KEGG   Flagellimonas oceani: GVT53_04285
Entry
GVT53_04285       CDS       T06500                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K15836  formate hydrogenlyase transcriptional activator
Organism
mut  Flagellimonas oceani
Brite
KEGG Orthology (KO) [BR:mut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mut03000]
    GVT53_04285
Transcription factors [BR:mut03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    GVT53_04285
SSDB
Motif
Pfam: Sigma54_activat PAS_9 PAS Sigma54_activ_2 PAS_3 AAA_5 AAA PAS_4 PAS_8 AAA_2 HTH_8 AAA_7 AAA_3 AAA_16 AAA_22 ATPase nSTAND3
Other DBs
NCBI-ProteinID: QII43924
UniProt: A0A6G7J025
LinkDB
Position
complement(906843..908972)
AA seq 709 aa
MKDKMQDALIKGQLMEKLPHEMCWLDEKGNIINANAKFRSALGYSKKECENLSISKINIT
VTPESWRKHWEEVHTNRNVRFTTIHKTKKGKFYEVEVNAQSFTYDGKKYICSILHELGET
GFYKNLIEDTQSMADLGGWELNLYDGSILATQCALTIFKAKNPEDLVPAKIIHKFKDSEK
VRSLLGQVINKGIAFEELFETNDSPPRYIRAMAKPILKGNKIYKVLGAYQDVTEFKNRES
DLGLLSTVINNAQDLIYVYNEQGDLLYYSESLIPTLGYSKEELDQMSMFDLDPAVTDEFY
NAHFDMLKAKGSHRFEWLIHRKDGTIFPVDITSSHLTYKGEDYCCSVVRDITTNKMHELQ
IYEALEEIKSLKERLEIENEYLQEEIGTKINFKNIICHSDAYKRVLVQVDQVAPTETTVL
ITGESGTGKELLARAIHNNSKRKERPLIKINCAVLPKDLIESELFGHKKGAFTGAVADKV
GKFTLADGGTIFLDEIGELPLELQPKLLRVIQEMEFDELGSTKTKKVDVRVIAATNRDLK
EMIRDGRFREDLYYRLNVFPIHNIPLRARKEDIPVLTQFFLEKYAMKAGKVFNRVSKDTI
EALLNYNFPGNIRELENMIERAVIVENGPTLKPGNWIPHKDIPASSVGFKSFESIQKDYI
IEVLDHTNWRVSGPSGAAKILKMKDKTLFAKMKRLGIEKVVSLKQRNNL
NT seq 2130 nt   +upstreamnt  +downstreamnt
atgaaagacaagatgcaagatgccctgatcaaagggcagttaatggaaaaactgccccat
gaaatgtgctggctggatgaaaagggcaacatcatcaacgccaatgccaagtttcgcagt
gcattgggctatagtaaaaaagaatgcgaaaacttatcaatttcgaaaatcaacattacc
gtaactcccgaaagctggcgaaaacattgggaggaggttcacacgaaccgtaatgtacgt
ttcacgacgatccacaagaccaaaaaagggaaattctatgaagtcgaggtcaatgcccag
agctttacctatgatggaaaaaaatacatatgttccatcttacatgaactgggagagacc
ggtttttacaaaaatctgatcgaggacacccagtccatggcggatttgggcgggtgggag
ctcaacttatatgatgggtccatcttggccacgcaatgtgccctgacaatattcaaggcc
aagaacccagaagacctggtccctgccaagatcatccataaattcaaggacagtgaaaag
gtcaggtctttacttgggcaggtcatcaacaaaggaattgcttttgaagagctattcgaa
accaacgattcccctccccgttatatcagggccatggccaaacccatcttaaaaggaaat
aaaatctataaggttcttggcgcctatcaagatgtgacagaattcaagaacagggaaagt
gacctgggccttttgagcaccgtgatcaacaatgcccaagatttgatctatgtatacaat
gaacaaggggatttattatactatagcgaatccttgattcccacgttgggctatagcaag
gaggaactggatcaaatgagcatgttcgatctagatcctgccgtcacggatgaattttac
aatgcgcattttgatatgttaaaggccaaaggctcgcatcggttcgaatggttgatccac
agaaaggacgggaccattttccctgtggacatcacttcaagtcatttgacctataaagga
gaggattactgttgctcagtggtgagggacattaccaccaacaaaatgcacgaacttcaa
atttatgaagctttggaagaaatcaaatccttgaaagagcgcttggagatcgaaaacgaa
tatttgcaggaggaaatcggcactaaaataaatttcaaaaacatcatatgtcatagtgat
gcctataagcgtgtacttgttcaagtcgatcaagtggcccctacggaaacaacggtattg
attaccggtgaatccggaacgggcaaggaattattggcaagggccatacacaacaatagt
aaaagaaaagaacgtcccctgatcaagatcaattgtgcagtccttcccaaggacctcatc
gagagtgaactgttcgggcataaaaaaggtgcctttacaggggctgttgccgacaaggtg
ggcaagttcacccttgcggacgggggaaccatcttcctcgatgaaatcggtgaattgcct
ttggaactgcaacccaaactactgcgagtaatacaggaaatggagtttgatgagttgggc
agcaccaaaacaaaaaaagtcgatgtacgtgtcattgccgccaccaatcgggatttgaag
gaaatgattcgtgatggcaggttccgggaggatctctattaccgactgaatgtatttccc
atacacaatatccccttgcgggcccggaaggaagacattccggtgctgacacagtttttt
ttggagaaatatgcaatgaaggccggcaaagtctttaatcgtgtatcaaaggatacgata
gaagccctgttaaattataactttccagggaacatcagggaattggaaaatatgatcgag
cgtgcggtcatcgtggaaaacggcccgaccctaaagcccggaaattggataccgcataag
gatattccagcatcgagcgtaggctttaaatcctttgagtccattcaaaaagattacatc
atcgaagtcctcgaccataccaattggcgggtcagtggtcccagtggagcggccaagata
ttaaagatgaaggacaagaccctttttgccaaaatgaagcgattgggcatcgaaaaagta
gtcagtctaaagcaaagaaacaacttgtga

DBGET integrated database retrieval system