Flagellimonas oceani: GVT53_04290
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Entry
GVT53_04290 CDS
T06500
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
mut
Flagellimonas oceani
Brite
KEGG Orthology (KO) [BR:
mut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mut03000
]
GVT53_04290
Transcription factors [BR:
mut03000
]
Prokaryotic type
Helix-turn-helix
Other families
GVT53_04290
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS_9
Sigma54_activ_2
PAS_4
AAA_5
PAS
PAS_8
AAA
AAA_2
Mg_chelatase
DUF2924
HTH_8
MCM
AAA_7
AAA_22
AAA_16
ATPase
nSTAND3
DUF1799
DUF2205
Motif
Other DBs
NCBI-ProteinID:
QII43925
UniProt:
A0A6G7IZE3
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All DBs
Position
complement(909159..911276)
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AA seq
705 aa
AA seq
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MKDVLDEFQLKAKLMDQLPYEVVWVGPDAKFIYANEKFCNTIGYNSRECGTLSVLDINTT
LTPEGWKAHWKEVMEKGSLNFTTVHKTKKGRFYDVEVYVQKFSYNGKNYLCAIAKEITEP
NFHKKIIDNTYEIGNIGGWELTLLDGSIMATPCAMEILKVKDLEGLTPPKVIHKFKDSGR
YRSLLGGVIRNGTAFDEILETNDSPPRYVRAAAKPILKGNKIYRVFGIYQDITEIKQKDS
DLNFHKAVMENARDFIAVFNKEGDVIHCNKSLMKHLGYSQDDMLNQKKIFELDPGASREW
WDAHFQEIIDKGSLNFERLLSRADDTQFPIDVTANHLRFNGQDYNCAVGRDITAKKMRDL
ELHEALQEIKALKERLEIENEYLQEEIGNKINFKSIISSSETYKSVLIQVEQVAPTDTTV
LITGESGTGKELLARAIHSNSKRGNRPLIKVNCATLAKELIESELFGHRKGAFTGATAHK
EGKFTLADGGTIFLDEIGELPLELQPKLLRVIQEGEFDELGGTKTIKVDVRIIAATNRDL
KEMIREGSFREDLFYRLNVFPIHNIPLRARKPDIPILAQYFLEKYSVKAGKAFKRLAPQT
LEKLMAYNFPGNIRELENLIERAVIIENGTTLNPGNWLPEQENLSLSNEFKSLEANQREY
IIGVLEHTQWRVGGPSGAAKILNVNDKTLFAKMKRLGIEKQISAK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatgtgctcgatgagtttcagctcaaggcaaagttgatggatcaattgccatac
gaagtggtctgggtgggtccggatgccaagtttatttatgccaacgagaaattttgtaat
accattggttacaatagcagggaatgcggcacattatcggttctggatatcaacacgacc
ctcacgccggaaggttggaaagcccattggaaggaggtcatggaaaaaggaagtctgaac
tttaccacggtccacaaaaccaagaagggtagattttatgatgtggaagtatacgtccaa
aaattctcatataacggaaaaaactatttgtgtgccattgccaaagaaattacagagccc
aactttcacaaaaagatcatagacaacacctatgaaatcggaaacatcggtggatgggaa
ttgaccttgcttgacgggtccattatggccaccccttgtgctatggaaattctcaaggtc
aaggacttggagggactcactcccccaaaggtcatccataagtttaaggacagtggtcgt
tacaggtccttgttgggaggagtcatcagaaatgggactgcctttgatgaaatactggaa
accaatgattccccacccagatatgtcagggccgcggcaaagcctatcttaaaagggaac
aaaatatacagggtatttggcatttatcaggatattaccgaaataaagcaaaaagacagt
gacttaaatttccataaggccgttatggaaaatgcccgtgactttattgccgtcttcaat
aaagaaggggatgtgattcattgcaacaaatccctgatgaaacatttgggatacagccag
gatgatatgttgaaccaaaaaaaaatatttgaactggatcccggggccagtcgagaatgg
tgggacgcccattttcaggaaatcatcgacaaaggttcgctgaatttcgaaagattgttg
tcaagggcggatgacacgcagttcccaatcgatgttacggcgaaccatttaagatttaat
ggacaggattacaactgtgccgtgggaagggacatcaccgcaaaaaaaatgcgcgatctg
gaattgcacgaggcactacaagaaataaaggccctgaaagaacgtctcgaaattgaaaat
gaatatctgcaggaggagatcggcaataaaatcaatttcaaaagcattataagcagcagt
gagacctataaaagcgtacttatacaagtggagcaagtggcccctaccgacaccacggta
ttgatcaccggggagtcgggcaccggaaaggaattgttggcccgtgccatccatagcaat
agtaagaggggaaaccgtccgttgatcaaggtcaattgtgccaccttggccaaagaactc
atcgaaagcgagctgttcgggcatagaaaaggtgcctttaccggggccacggcccataag
gagggcaagttcacccttgccgacgggggcaccatctttttggacgaaatcggtgagttg
cccttggagctccaacccaaattactcagggtcatccaggaaggtgaattcgatgaactg
ggcggtaccaagaccatcaaggtcgatgtgcgaatcattgccgcaacgaacagggattta
aaggaaatgattcgggaaggcagttttagggaagacctgttttatcgtttgaacgtattc
cctatccacaatatccccttaagggcaagaaaaccggacattccgatactggcgcaatac
tttttggaaaaatattccgtaaaagcaggaaaggcctttaagcgtttggcaccacaaaca
cttgaaaagctcatggcgtacaactttccgggcaatatccgtgaattggaaaacctgatc
gaacgtgccgtcatcatcgaaaacggtactacgctcaacccgggcaattggctaccggaa
caggaaaacttatcgctttccaatgaattcaaatccttggaagccaatcaaagggaatat
attatcggggtattggaacatacacaatggcgcgtagggggaccgagtggcgcggcaaaa
attttaaacgtgaacgacaagaccttgttcgccaaaatgaaacgactcggtatagagaaa
caaatttcggccaagtag
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