Flagellimonas oceani: GVT53_07595
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Entry
GVT53_07595 CDS
T06500
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
mut
Flagellimonas oceani
Pathway
mut02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mut00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GVT53_07595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mut03021
]
GVT53_07595
Transcription machinery [BR:
mut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GVT53_07595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
PgaD
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QII44545
UniProt:
A0A6G7J166
LinkDB
All DBs
Position
complement(1627386..1628249)
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AA seq
287 aa
AA seq
DB search
MRQLKIIKQVTNRESKSLDKYLQDISKIDLITAQEEVELAQKIRAGDQAALEKLTNANLR
FVVSVAKQYQNQGLKLPDLINEGNVGLVKAAKRFDETRGFKFISYAVWWIRQSILQALAE
QSRVVRLPLNKIGSINKIKKTFSYLEQAHERPPSPEEIAKELDMTVSEVKQSLKNTGRHV
SMDAPLKEGETSNLYDVLNAGDSPKPDKGLMHQSLNTEINRALDTLSPREADVVRLYYGI
GDQPSMTLEEIGSTFDLTRERVRQIREKAIRKLRHTSKSKILKSYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagctaaaaatcatcaaacaggtcacgaaccgggaatccaaatcacttgacaaa
tacttgcaggacatcagtaaaatagatttgatcaccgcgcaggaggaagttgagctagca
cagaagatcagggccggtgaccaagctgctttggaaaaattgacgaacgcaaacctaagg
tttgtggtctccgtggcaaaacagtaccagaaccaaggcttaaaactgcccgatttgatc
aacgaagggaacgttggcttggtaaaagccgccaaacgttttgacgaaacccgtggattt
aaatttatatcctacgccgtttggtggattcgtcagtcaatcttacaggccttggcggag
caatcccgtgtggtgcgcttacctctgaacaagatcgggtccatcaacaagatcaaaaaa
acattttcttacttggagcaggcgcatgagcgtccgccatccccggaagagatcgccaag
gaattggacatgacggtttccgaggtaaagcaatctttaaagaatacggggcgtcacgtg
tccatggatgcgcccttgaaagaaggcgagacttccaatttgtacgatgtgctgaatgcc
ggggactcaccaaagccggacaaagggttgatgcaccagtccttgaacaccgaaataaat
agggcgttggacaccttatccccgagagaagccgatgtggtacgattatattacggaatc
ggcgaccaaccttccatgaccttggaagaaattggcagcacttttgatctgaccagggag
cgtgtacgccaaatccgtgaaaaagcaatcagaaaattaaggcatacctcaaaaagcaag
attttaaagtcttatttgggataa
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