Flagellimonas oceani: GVT53_08045
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Entry
GVT53_08045 CDS
T06500
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mut
Flagellimonas oceani
Pathway
mut03030
DNA replication
mut03430
Mismatch repair
mut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GVT53_08045 (holA)
03430 Mismatch repair
GVT53_08045 (holA)
03440 Homologous recombination
GVT53_08045 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mut03032
]
GVT53_08045 (holA)
03400 DNA repair and recombination proteins [BR:
mut03400
]
GVT53_08045 (holA)
Enzymes [BR:
mut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GVT53_08045 (holA)
DNA replication proteins [BR:
mut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GVT53_08045 (holA)
DNA repair and recombination proteins [BR:
mut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GVT53_08045 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
EXOC6_Sec15_N
Motif
Other DBs
NCBI-ProteinID:
QII44632
UniProt:
A0A6G7J2E8
LinkDB
All DBs
Position
complement(1725072..1726073)
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AA seq
333 aa
AA seq
DB search
MDKVKEIVSEIKNGNPKPIYFLMGEEPYYIDRISQYIAQNVLTEDEKGFNQMVLYGKDTT
IDDIVANAKRFPMMAQYQVVIVKEAQHLSRTIENLVSYAENPQPTTILVLCYKYKKLDKR
KKLYKAIKKSGELFESKKLYDNQVADWIRRTLAGKKYKISPKSCIMLVEFLGTDLSKISN
ELDKLTLIVPPTTEITPELIEEHIGISKDFNNFELKKAIGERDVKKASRIIDYFAQNPKD
NPFVVTVTLLNTFFTQLLQYHGLKDHSPGNVAKVLGVNPYFVNEYVVAAKNYPMKRVSGI
ISSLRTLDLKGKGVGASNMAQADLLKELLSEII
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtaaaggagattgtatcggaaatcaagaacggtaatccaaaacctatttat
tttttaatgggggaggagccttattatattgataggatttcccaatacattgcccaaaac
gtgcttacggaagacgaaaagggctttaaccagatggtactttatggcaaggataccact
attgacgatattgttgccaacgcgaagcgctttcccatgatggcgcagtaccaagtggtg
atcgtaaaagaggcacagcacctctccaggaccatcgaaaaccttgtttcctatgccgag
aacccccagccgaccaccattttagtactctgttacaagtacaaaaaactggataagcga
aaaaaactctacaaggccattaaaaagagcggggagctttttgaaagtaaaaaactgtac
gataatcaggttgccgattggatccgcaggaccttggcgggcaaaaagtataagatttcc
cccaagtcctgcataatgttggtggaatttttgggaaccgatttgagcaagatcagtaac
gaactagacaagttgacgttgatcgtaccgcctaccacggaaataacgccggagttgatc
gaggagcacataggaataagtaaggatttcaataattttgagctaaaaaaggcgatcggg
gagcgtgacgtcaaaaaggcatcacgaattattgattacttcgcccaaaacccaaaggac
aacccttttgttgtaacggtcacattactgaataccttttttacacagctcttacaatac
catggccttaaggaccattcccccggtaacgtggccaaggtacttggtgtaaacccttat
ttcgtgaacgagtacgtggtggccgcaaaaaattaccctatgaaaagagtgagcggtata
atttccagtttaaggacgttggacctcaagggcaaaggggtaggggccagtaacatggcg
caggccgatttactgaaggaactcctttccgaaataatctaa
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