Flagellimonas oceani: GVT53_08080
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Entry
GVT53_08080 CDS
T06500
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mut
Flagellimonas oceani
Pathway
mut03420
Nucleotide excision repair
mut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GVT53_08080
03430 Mismatch repair
GVT53_08080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mut03400
]
GVT53_08080
Enzymes [BR:
mut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GVT53_08080
DNA repair and recombination proteins [BR:
mut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GVT53_08080
MMR (mismatch excision repair)
Other MMR factors
GVT53_08080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
HsdM_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QII44639
UniProt:
A0A6G7J1Z5
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Position
complement(1732468..1734798)
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AA seq
776 aa
AA seq
DB search
MSNFIDELNDAQRAPVLHKDGPLMVIAGAGSGKTRVLTYRIAHLMEQGVDSFNILALTFT
NKAAREMKKRIATIVGNSEAKNLWMGTFHSVFAKLLRFDGDKLGYPSNFTIYDTQDSQRL
IAAIIKEMGLDKDVYKYKQVQNRISSYKNSLITVKAYFQNPELMEADAMAKRPRLGEIYQ
NYVDRCFKAGAMDFDDLLLRTNELLTRFPEVLMKYQDRFRYILVDEYQDTNHSQYLIVKA
LSDRYQNICVVGDDAQSIYSFRGANINNILNFQKDYDDVAMYRLEQNYRSTKNIVSAANS
IIANNKNQLEKNVWTSNDDGGLIKIHRSVTDAEEGRYVAGSIFENKMQNQMQNGEFAVLY
RTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVLAYLRLIVNPKDEEALKRVINFP
TRGIGQTTIDKLVVAANHYGRSIYEVMDNLDRLNLNINAGTKRKLADFVTMIKSFQIMNE
GSDAFTLSEHVAKKTGLLLEFKKDGTPEGIAKMENIEELLNGIKDFVEGQKEIADATGSL
TEFLEDVALATDMDKDIEDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEKQAFLTYTQNRYRWGKLIDAEPSRFLEEIEERYVENLTPVNDGY
RYKSTIDKNIFGEVDKSKLRQVKPQNGTPPSVQKPNENQLRKLRKLKPEISSPAQPMDLD
PGLVTGARVNHTRFGRGKILNIEGAGNDRKAEIHFDQGGIKKLLLRFAKLEVLDNA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaattttatagatgaattgaatgatgcgcagcgcgctcccgtgctgcacaaggat
ggacctctaatggtaattgccggtgccggctccggaaagacccgtgtgcttacctacaga
atcgcccatttgatggagcaaggggtggattcctttaatattttggccctgacctttacc
aacaaggcagcgcgtgaaatgaagaagcgtattgcgaccatcgtggggaattccgaggcc
aagaacctgtggatgggcacgttccactccgttttcgccaaattgctgcgttttgatggt
gacaaactgggctatccgagcaactttaccatttacgatacccaagattcccaacggttg
atcgctgccattatcaaggaaatgggcctcgataaagatgtgtacaagtacaagcaggtc
cagaaccgaatctcctcttataaaaacagtttgatcaccgtaaaggcctatttccagaat
cctgaattgatggaggccgacgccatggcgaaacgccccagattgggggagatctatcag
aattatgtggaccgatgctttaaggcgggtgccatggattttgatgaccttttgttgcgc
accaacgaactgttgacccgttttccggaggtattgatgaaataccaagatcgtttccga
tatattttggtggatgagtaccaggataccaaccactcccagtacctgattgtaaaagct
ttgtccgatcgttatcaaaacatttgcgtggttggggacgatgcccagagtatttattcc
tttaggggggccaacattaacaacatcctcaactttcaaaaggattacgacgatgtggcg
atgtaccgtttggaacagaattaccgttccaccaaaaatatagtgagtgcggccaattcc
atcattgccaacaataaaaaccagttggagaagaacgtttggacttccaatgatgatgga
ggattgataaaaatacaccgcagtgtaacggatgccgaagaaggacgctacgtggcgggc
tccatttttgagaacaagatgcaaaaccagatgcagaacggggaatttgcggtgttgtac
cgtaccaattcacaatcccgtgccatagaggatgcattgcgcaaacgggatattccatac
cggatttatggtggattatctttttatcaacgtaaggagataaaggatgtacttgcttat
ttacgattgattgtcaatccaaaagatgaggaagcgctaaaacgtgtcattaactttcca
acaagggggatagggcagaccactattgataaactggtggttgcggcgaaccattacggg
aggtccatttacgaggtgatggacaatctggacaggttgaacctgaacatcaatgcaggt
acaaagcgcaagttggccgattttgttaccatgatcaaaagttttcagatcatgaacgaa
ggttcggatgcctttacgctgtccgaacatgtggccaaaaaaacagggttgttgttagag
ttcaaaaaagatggtactcccgaggggattgccaagatggagaacatcgaagagcttctc
aatggtatcaaggactttgtggagggccagaaagaaattgccgatgcgaccggaagtttg
acagaatttctcgaggatgtggccctcgccaccgatatggacaaggatatcgaggatgat
gatagagtggctttaatgaccattcacttggcaaaaggtttggagttcccctatgtttac
attgttgggatggaagaggatttgttcccatctgccatgagcatgaacacccgaagcgaa
ctcgaagaagagcgacgactgttctacgttgcccttacccgagccgaaaaacaggccttt
ttgacctatacccaaaacaggtaccgctggggtaaattgatcgatgcggagcccagtcgt
tttttggaggaaattgaggagcggtatgtggagaacctgacccctgtcaatgatggctat
cggtataaatccacgatcgataaaaatatttttggcgaggtggacaagagcaaactacgc
caggtaaaaccacagaatggtacgccaccaagtgtacaaaagcccaacgaaaaccaatta
cgcaagttgcgcaaactaaagccggagatatcgtctcccgcgcagccgatggatttggac
cctggtttggtaacgggagcgcgcgttaaccacactcgttttggaaggggaaaaatctta
aatattgagggagccggcaatgataggaaggctgaaatccattttgatcaaggtgggatc
aagaaattattgctccgttttgccaaacttgaggttttggacaatgcctaa
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