Flagellimonas oceani: GVT53_08675
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Entry
GVT53_08675 CDS
T06500
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mut
Flagellimonas oceani
Pathway
mut03030
DNA replication
mut03430
Mismatch repair
mut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GVT53_08675
03430 Mismatch repair
GVT53_08675
03440 Homologous recombination
GVT53_08675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mut03032
]
GVT53_08675
03400 DNA repair and recombination proteins [BR:
mut03400
]
GVT53_08675
Enzymes [BR:
mut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GVT53_08675
DNA replication proteins [BR:
mut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GVT53_08675
DNA repair and recombination proteins [BR:
mut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GVT53_08675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
GIY-YIG
DEDDh_C
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QII44751
UniProt:
A0A6G7J1K6
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All DBs
Position
1870271..1871587
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AA seq
438 aa
AA seq
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MYAILDIESTGGKYNEEGITEIAIHRFDGHQVVDKFICLINPEREIQPFVAKLTGINNKM
LRSAPKFHEVAKRIVEITDGATLVAHNAQFDYRILRTEFRRLGYDFQRKTLCTVDLSKQL
IPEAESHSLGKLARSLGIPMSDRHRANGDALATLKLFKLLLDKDSDKNIITEVIREETHG
ELSPNQLDMVFNLPSETGVYYMHDKDGEIIFLGKTKDIKKRVNQHFTNVGKLARKLQKET
KKVTYETTGSELIAILKAYVEQKKNRPRYNHVSKKKLFTHTIDFNQNGTEHIVLEVEKNR
TLEHKKMAFNGIQSAKSFLNKISEEFELCPCSLGTGPVEAEKASECNDKVLSAFEKYSIQ
NKDIALIDRGRETGERSFILIKNGKLQGFGFVELNHQINNIHILESIMTPIKSDDNTTFI
VETYLRKNNRLKTIALTP
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcgatacttgacattgaaagcacgggaggaaaatacaatgaggaaggcattacc
gaaatcgccatccacaggtttgatgggcatcaggtggtagacaaattcatctgtttgatc
aatccagaacgggagatacagccttttgtggccaaactcacgggaatcaacaataaaatg
ctgcgctcggcgcccaagtttcacgaagtggccaaacgcattgtggaaattaccgatggt
gccactttggtggcgcacaatgcccaattcgattatcgcatcctaagaacggagtttaga
cgtttgggatacgattttcagcgcaaaacgctttgtaccgtcgacctttccaaacagctc
atacccgaagcggaatcgcacagtttgggcaaattggcacgttcgttgggcattcccatg
agcgataggcaccgggcgaacggggatgcgcttgccacattaaagctctttaaattgttg
ttggacaaggattcggacaagaacatcatcaccgaggtcatccgcgaagagacccatggg
gaactctctcccaaccaactggatatggtatttaaccttccgtccgaaacaggagtgtac
tatatgcacgacaaggatggggaaatcatctttctagggaagaccaaggacatcaagaaa
agggtgaaccaacattttaccaatgtgggcaaactggcaagaaaacttcaaaaagaaacg
aaaaaagtcacctacgaaaccactggaagcgagcttattgccattttaaaggcctatgtg
gagcaaaaaaagaacagaccgcgatacaaccatgtttcaaaaaagaagctttttacccat
accatagattttaatcaaaatggtaccgagcatatagtgttggaagtggaaaagaaccgg
actctggaacacaaaaaaatggctttcaatggaattcagtccgccaagagctttttgaac
aaaatatccgaagagttcgaactttgcccatgttctctggggacgggccccgtggaggct
gaaaaggcatcagaatgtaacgacaaggtgctttccgctttcgaaaaatatagcattcaa
aacaaggatattgcacttatcgatcgtggaagggaaaccggggaaagaagttttatcttg
ataaagaatggtaaacttcaaggatttgggttcgtggagctcaaccaccaaatcaataat
attcatatcttagaatcgataatgactccgataaagagcgatgataacaccacctttatc
gttgaaacctatttgagaaaaaacaaccgtttaaagaccattgccctaactccctga
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