Flagellimonas oceani: GVT53_08995
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Entry
GVT53_08995 CDS
T06500
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mut
Flagellimonas oceani
Pathway
mut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GVT53_08995 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mut03400
]
GVT53_08995 (priA)
Enzymes [BR:
mut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GVT53_08995 (priA)
DNA repair and recombination proteins [BR:
mut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GVT53_08995 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
Zn_ribbon_6
TrmB
nSTAND3
DUF7375
PRS7_OB
AAA_19
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QII44812
UniProt:
A0A6G7J2X3
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All DBs
Position
complement(1947112..1949571)
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AA seq
819 aa
AA seq
DB search
MDYFLDVVLPIPLERRFTYKITQAEADFIKEGMRVAVPFGKSKIYTALAYSVHQNAPEAY
EPKEIYQILDEQPVVTQVQLKHWEWVAKYYMCTLGEVIRSALPSAFMLESETLILPNKNA
DVDEAELTDDEFLVFEALQHQTALKISEISDIVDKKNVLKLINMLVHKGVVLQKEELYEQ
YKPKLVRYVKLSEKYDDEEQLADLLNELTRAPKQSQVVLSLFQLKSKKGNKPIAIAELEK
ESRASRAVIKSLIDKNILEEYHIRKDRVDFDERSEASRHIDLNEYQQQALEDISKGFDEK
KPVLLHGVTSSGKTEVYVKLIQKCLEEGKQALYLLPEIALTSQLINRLRQYFGHQVSVYH
SKYSIHERVEVWNNVLGNAEKAQIVLGARSSLFLPFSNLGLVVVDEEHENSFKQFDPAPR
YHARDAAVVLASMHRANIVLGSATPSIESMYNARIKKYGYASIAHRFGDVLMPDINLVDI
KEATRKRRMKGHFSEILIKTITEALEEGEQIILFQNRRGFAPVVECTTCGHVAQCPNCDV
SLTYHQHRNQLRCHYCGYHMALQQACLACGSSTLDNKGFGTEQIQQELGQLFPDVSVGRM
DLDTTRGKYAYEKIISSFENQEMDILVGTQMVTKGLDFRNVSLVGIMNADSMLNFPDFRA
HERSFQMLTQVAGRAGRTQKRGKVLIQTYNPYHQILQQVTTNNYDKMFEEQFYEREQFKY
PPLVRLIKITLKDKDFNKLNEASDWMAGSLRNVLGPNILGPEYPPVARIRRDYLKNIMVK
IPQKQPLAQTKNSIKRIEKSFNAISKYKSVRLVYNVDHI
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggattattttttggatgttgttcttcccattcctttggaaagacgcttcacatataaa
attacgcaggccgaagcggattttatcaaggaaggaatgcgcgtggccgttcctttcgga
aaatcaaaaatttatactgccttggcctatagcgtgcatcaaaatgcacctgaagcctac
gaacccaaggaaatttatcaaattcttgacgagcaacctgttgtgacccaagtgcagttg
aagcattgggaatgggtggccaaatactacatgtgcactttgggagaagtcattaggagt
gccctgcccagtgcttttatgttggagagcgaaacactgattttgcccaataaaaatgcg
gatgtagatgaagcggagcttaccgatgatgaatttttagtgttcgaggccctgcagcat
caaaccgccttaaaaatttccgaaatcagtgatattgttgacaagaaaaacgttttgaaa
ctcatcaatatgttggtgcataaaggtgtagtgcttcaaaaagaagaattgtacgaacag
tacaagcccaagttggtacgctatgtaaaactttcggaaaaatatgatgatgaggaacaa
ctggccgacctgttgaacgaacttacccgggcgcccaagcaaagccaagtagtgctttct
ctttttcagctaaaatctaaaaaaggaaacaagcccattgccattgccgaactggaaaaa
gagagcagggcctcccgagcggtgataaagtcgcttatcgataaaaatattttggaagaa
taccacattcgaaaagatcgagtggattttgacgagcgttcggaggcatctcgccatata
gatctgaatgaataccagcagcaagctttagaggatatcagcaaaggttttgatgaaaaa
aagccagtgcttttgcatggcgtcacatcgtcagggaaaaccgaggtttacgtaaaactc
attcaaaaatgtttggaagaaggtaaacaggcgctgtatttgcttccggagattgcattg
acttcacaattgatcaatcgactgaggcaatatttcggacatcaagtatccgtttatcat
tcaaaatacagtatccacgaaagggtagaggtgtggaacaatgtgttggggaatgccgaa
aaggctcaaattgtacttggtgcccgttcatcactctttttgcccttctccaatttgggt
ttggtagtggttgatgaagaacacgaaaattcctttaagcaatttgatcctgcgccgcgc
tatcatgcccgggatgctgcggtagttttagcttccatgcacagggccaatattgttttg
ggttccgctacgccaagtatagagagtatgtacaatgccaggataaaaaagtatggctac
gcttccattgcgcatcgatttggcgatgtattgatgccggacatcaatttggtggatata
aaggaagcgacccgtaagcgtaggatgaagggacatttttcggaaattttgatcaagacc
ataacagaagcattggaggaaggggaacaaatcattctgtttcaaaatagacggggcttt
gccccggtggtggaatgcacaacctgcggacatgtggcccaatgtcccaattgcgatgtg
agcttgacctatcatcagcatagaaatcaattgcgttgccactattgcggctatcatatg
gccttgcaacaagcttgtttggcctgtggaagttctactttggataacaagggcttcggc
acggaacagattcaacaggaattggggcagttgttccccgatgtttcggtagggcgaatg
gatttggacaccacaagagggaaatatgcgtatgaaaaaatcatttcatcttttgaaaac
caagagatggatattttggtgggtacccaaatggtgaccaagggattggactttagaaat
gtaagtttggtaggcatcatgaatgcggattccatgctcaacttccccgattttcgcgcc
catgaacgcagttttcaaatgctcacgcaggttgcgggcagggcagggcgtacccaaaaa
cgtggaaaggtgctcattcagacctacaacccgtaccatcagattttgcagcaggtaacc
accaacaattacgataaaatgttcgaagaacagttttatgaaagggagcagttcaagtac
ccacctttggtgcgactcatcaaaatcacgttaaaagataaggatttcaataaattgaac
gaggcttcggattggatggcgggttcgttgcgcaatgtgttgggcccaaacattcttggt
cccgaatacccacctgtggctcggataagaagagattatttaaaaaacataatggtcaaa
atacctcagaaacagcctttggcgcaaacaaaaaatagcattaaaagaatcgagaaatcc
tttaatgctatttccaagtataaaagtgtacggttggtctacaacgtggaccacatataa
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