Flagellimonas oceani: GVT53_09035
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Entry
GVT53_09035 CDS
T06500
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mut
Flagellimonas oceani
Pathway
mut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GVT53_09035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mut03019
]
GVT53_09035
03009 Ribosome biogenesis [BR:
mut03009
]
GVT53_09035
Enzymes [BR:
mut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GVT53_09035
Messenger RNA biogenesis [BR:
mut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GVT53_09035
Ribosome biogenesis [BR:
mut03009
]
Prokaryotic type
rRNA helicases
GVT53_09035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_helical
DbpA
ResIII
Cas3-like_C_2
AAA_22
Plasmid_parti_C
Motif
Other DBs
NCBI-ProteinID:
QII44819
UniProt:
A0A6G7J2H8
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All DBs
Position
1955782..1957539
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AA seq
585 aa
AA seq
DB search
MTKFEALGLDKPLLDAISDLGFESPSEVQEKSIPILLDQETDLVALAQTGTGKTAAFGFP
MIQKIQHDSRTTQGLILSPTRELCLQITNELKLYSKYIKGLNVVAIYGGASITEQARQIK
RGAQIIVATPGRMKDMIGRNMVDISKIDYCVLDEADEMLNMGFYEDIKDILSNTPQEKFT
WLFSATMPKEVATIAKKFMKNPVEITVGSKNAGASTVQHEYYVVGGRDRYAALKRLADAN
PGIFSVVFCRTKRDTQRVAEKLIEDGYNAGALHGDLSQNQRDLVMNSFRKKQVQMLVATD
VAARGIDVDDVTHVINYQLPDEIETYTHRSGRTGRAGKSGISMVIITRSELRKIKAIEKK
IQQEFLSKNIPDGIEICEIQLYHLANKIKETKINKEIENYLPAINDVLEGIDRDELIKKI
VSVEFTQFYNYYSKSKDLNSQDSGKERGASKGDVPSEGSVRYFINVGERDGYDWMSLKDF
LRDTLNLEKEDVYNVDTKDSFSFFNTDAQLTEFILQTFTDFKLEGRFINVEVSKNPGAGG
GGKGGKKRRGRKGGGGGHRKGGSSYKGGKKGGYGKKGGKKKQGFY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatttgaagccttggggttggacaaacccctattggatgctatttccgacctt
ggatttgaatccccctctgaagtacaagaaaaatcaatcccaattttattggatcaagaa
accgatctggttgccttggcgcaaacaggaacaggtaaaactgctgcctttggatttccg
atgattcaaaaaatccaacacgacagcagaaccacccaagggttgattctctcccctacc
cgggaactctgtttacagattaccaacgaactaaaactctattccaaatacataaaagga
cttaatgttgtggccatttatggtggcgccagcattacggaacaggccagacagataaaa
agaggtgcacagattattgtggcaacccctggccgtatgaaggatatgatcggccgaaac
atggtggacatctccaaaatcgattattgtgtattggacgaagccgatgaaatgttgaac
atgggcttctacgaagatatcaaggacattttgtccaacacccctcaagaaaaattcaca
tggcttttttctgcgacaatgcccaaggaagtggctacgatcgccaaaaagttcatgaaa
aaccctgtggagataaccgtgggttccaaaaatgccggagcttctaccgtacagcacgag
tattatgtggtgggcggacgtgaccgctatgcggccctaaaacgtttggccgatgccaat
ccaggtatcttctccgtagtattctgtagaaccaaaagggatacccaacgtgtggccgaa
aagcttatcgaagatggctacaatgccggtgctttgcatggggatttgagtcaaaaccaa
cgtgatttggtcatgaactccttccgaaaaaaacaagtgcagatgttggtggccaccgat
gtggcggcccgtggcatcgatgtggatgacgtgacccacgtgatcaactatcaattgcct
gatgaaatcgagacctatacccaccgaagtggccgtacaggacgtgccggaaaatccggt
atctccatggtcatcatcactcgttcggaattgagaaagatcaaggccatcgagaaaaag
attcaacaggagttcttgtccaagaatattccggacggcatcgaaatctgcgagatccaa
ttatatcacttggccaataagatcaaggaaaccaaaatcaataaagaaattgagaattac
ctaccggccatcaacgatgttttggaaggtattgatcgggacgaactcatcaaaaaaatt
gtttctgtagaatttacacagttttacaattactacagcaaatccaaagatctcaacagt
caggattccggcaaggaaaggggagcttcgaaaggggatgttccatccgaaggttccgtt
cgttactttatcaatgttggggaacgtgatggatacgattggatgagcctgaaagatttc
ttgcgcgacaccttgaacttggaaaaagaggatgtttacaatgtggacaccaaagattct
ttctctttcttcaataccgatgcacaacttaccgaattcatccttcaaacctttaccgat
tttaaattggaaggacgttttatcaatgtagaagtttccaagaatccaggtgccggcggc
ggtggaaaaggaggaaaaaaacgtcgtggccgaaaaggcggaggcggaggccatcgtaag
ggcggcagctcctataaaggcggaaaaaaaggtggttatggcaaaaagggaggtaaaaag
aaacagggattttattag
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