Flagellimonas oceani: GVT53_13265
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Entry
GVT53_13265 CDS
T06500
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mut
Flagellimonas oceani
Pathway
mut03030
DNA replication
mut03430
Mismatch repair
mut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GVT53_13265
03430 Mismatch repair
GVT53_13265
03440 Homologous recombination
GVT53_13265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mut03032
]
GVT53_13265
03400 DNA repair and recombination proteins [BR:
mut03400
]
GVT53_13265
Enzymes [BR:
mut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GVT53_13265
DNA replication proteins [BR:
mut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GVT53_13265
DNA repair and recombination proteins [BR:
mut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GVT53_13265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QII45604
UniProt:
A0A6G7J4Z1
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All DBs
Position
2901523..2902893
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AA seq
456 aa
AA seq
DB search
MYTIIDIETTGNGIKGNKITEISIFKHDGNQIVDEFTSLVNPESPIPYFITGLTGIDDQM
VQNAPTFKEIAQNVLSITEDCVFVAHSVNFDYGVIKEEFRQIGVDFTRKKLCTVRLSRKL
IPGLRSYSLGKLCSAVQIPLSDRHRARGDAHATVLLFEKLLKDPESEGVFKLFLNARSQE
ATLPPHLPKAVFDKIPHKPGIYYFMNQKGEIIYVGKAINLKKRVLGHFYDKSRKELQMCG
ETAHIDFKLAGSELVALLMESAEIKRLFPPYNRAQKRAGKQYAIFAYEDRNGIVHLAYNT
IKGVPNPLKVFHNQTECRAYLEEVCKSFSLCPKYCHLQQTTAACSHHQINTCEGICKGEE
SPEDYNQKVEEAIAHMKLLSSEVRIIKEKGRVENESAVILIADGIYKGFGFIDMDIEISS
LEDVETFITPQKHTLETESILTQYFLKHGRNQVLAS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttgtacaccatcatcgacatagagaccacgggaaacggaatcaagggcaacaagattacc
gagatttccatttttaaacatgatgggaatcagatcgtggacgaatttacgtccttggtg
aacccagagagccccattccctattttataacgggacttaccggaattgatgaccaaatg
gtgcaaaatgctcctacttttaaagaaatcgcccaaaacgttttaagcattaccgaggac
tgtgtttttgtggcccactcggttaattttgattatggggtgatcaaagaggagttccga
caaatcggggttgattttacccgaaaaaaactctgtacggttcggctatcccgaaagttg
attcctggcctgcgctcctacagtctgggaaaattgtgctccgctgttcaaattccgcta
tcggacaggcaccgagcccgcggagatgcacatgccacggtgcttctgttcgagaagctg
ttgaaggaccctgaatcggaaggggtctttaaattgtttttgaatgcccgaagtcaagaa
gccacacttccgccccatttgcccaaagcggttttcgacaagatcccgcacaaaccgggc
atctattattttatgaaccaaaagggggagattatttatgtgggcaaggccatcaacctg
aaaaaaagggtgttggggcacttttacgacaagagccgcaaagagcttcaaatgtgcggg
gagacggcccatatcgactttaaactggcaggcagcgaactggtcgccctgttgatggaa
tccgcagaaataaaaaggttgttccctccctataaccgcgcccaaaaaagggcgggcaag
caatacgccatttttgcctatgaagaccgaaatggaattgtccaccttgcctacaatacc
attaagggggttccgaatccgttaaaggttttccataatcaaaccgaatgccgggcatat
ttggaagaggtgtgcaaaagtttttccctttgccccaaatattgtcatctgcaacagaca
actgccgcttgctcccatcatcaaataaatacctgcgaaggaatctgcaaaggcgaagaa
tctccggaggattacaaccaaaaggtcgaggaagcgatcgcccacatgaaattgttgtca
tccgaagtccgtatcatcaaagaaaaaggcagggtcgaaaatgaaagcgccgtgatttta
attgcggacggtatctacaaagggtttggttttatagatatggacattgaaatatcctct
cttgaagatgtcgaaacatttatcacgccccaaaaacatacgttggagacagaaagcatt
cttacccaatattttttaaagcatggcaggaaccaagtgcttgcgtcttaa
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