Flagellimonas oceani: GVT53_13460
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Entry
GVT53_13460 CDS
T06500
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mut
Flagellimonas oceani
Pathway
mut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GVT53_13460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mut03021
]
GVT53_13460
03400 DNA repair and recombination proteins [BR:
mut03400
]
GVT53_13460
Enzymes [BR:
mut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GVT53_13460
Transcription machinery [BR:
mut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GVT53_13460
DNA repair and recombination proteins [BR:
mut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GVT53_13460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QII45641
UniProt:
A0A6G7J434
LinkDB
All DBs
Position
complement(2942812..2943804)
Genome browser
AA seq
330 aa
AA seq
DB search
MALLNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRID
GVEHEFSVIPGVVEDVTEIILNLKQVRFKRQIDDVESETVSISVSGKEQMTAGDFQKFIS
GYQVLNPDLVICNMDPKVNINMEIVIEKGRGYVPAEENKKSNAPLGSIAVDSVYTPVKNV
KYSIENYRVEQKTDYEKLVFEIITDGSIHPKDALTEAAKVLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVINKGLQFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcattacttaattttcagaagcccgataaagttataatgatcgattcaacagatttc
gaggggaaattcgaatttcgtcccttggaacctggatatggattaacagttgggaatgcg
ctgagaagggttttgctttcctctttggaaggttttgccatcacttctgtgcgcatagat
ggagttgaacatgagttttctgttatcccaggcgttgttgaagacgttaccgaaattatc
ctgaacctaaaacaagtgaggttcaaaagacagattgatgatgttgagagcgagaccgtg
tctatttccgttagcggaaaggaacaaatgaccgctggtgacttccaaaagttcatctca
ggatatcaagtgctgaacccagacttggtaatctgtaacatggaccctaaggtgaacatc
aatatggagatcgttatcgaaaaaggtcgtggttatgttcctgccgaggaaaacaaaaaa
tccaatgcacctttgggcagcattgcggtagattctgtttacactccagtaaagaacgta
aaatacagcatcgaaaactatagggtagagcaaaagaccgattacgaaaaattggttttc
gaaatcatcaccgatggttccatccacccaaaagatgccttgacagaggccgctaaagtt
ctgattcaccactttatgttgttctccgatgagcgtatcacccttgaggccgatgaaatt
gcccagaccgagacctacgatgaggaatcattgcacatgcgccagttgttgaagaccaaa
ttggtagacatggacttgtccgtaagggcattgaactgtttgaaagctgccgaagtggat
actttgggagatttggtttccttcaataaaaacgatttgatgaagttcagaaacttcggt
aaaaaatcattgaccgaattggaagaattggtcatcaacaaaggcctgcaatttggtatg
gacctttccaaatacaaattagataaagattaa
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