Flagellimonas oceani: GVT53_14690
Help
Entry
GVT53_14690 CDS
T06500
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mut
Flagellimonas oceani
Brite
KEGG Orthology (KO) [BR:
mut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mut03032
]
GVT53_14690 (topA)
03400 DNA repair and recombination proteins [BR:
mut03400
]
GVT53_14690 (topA)
Enzymes [BR:
mut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GVT53_14690 (topA)
DNA replication proteins [BR:
mut03032
]
Prokaryotic type
DNA Topoisomerases
GVT53_14690 (topA)
DNA repair and recombination proteins [BR:
mut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GVT53_14690 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Nuf2
Motif
Other DBs
NCBI-ProteinID:
QII45869
UniProt:
A0A6G7J5H6
LinkDB
All DBs
Position
complement(3238577..3241063)
Genome browser
AA seq
828 aa
AA seq
DB search
MPKNLVIVESPAKAKTIEKFLGKEFQVESSFGHIADLPSKELGVDVENDFKPKYTVDKEK
KALVKKLKDLANKAETIWLASDEDREGEAISWHLAEELGLDKDKTKRIVFNSITKSAIQK
AIENPRDINYNLVNAQQARRVLDRLVGYELSPVLWKKIKPGLSAGRVQSVAVRLIVERER
EIEGFTPEASFRIKAEFKTHEGNTFGAKLNTTFPTKQAAESFLKENIGADFSVSDLAQKP
AKKSPAAPFTTSTLQQEASRKLYFSVSRTMQVAQRLYEAGLITYMRTDSVNLSNEALAAA
KDAILDNYGEKYSQTRNFTGKSKGAQEAHEAIRPTDMKLQSPQLERDQAKLYELIWKRTL
ASQMSDAQLERTNVKIKASTHSEEFSANGEVVKFDGFLKVYLEGTDDEDGEEQDGMLPAM
KVGEPLQNVFISATERFSRPPYRYSEASLVKKLEELGIGRPSTYAPTISTIQNRGYVEKG
TVEGSERKYAQLVLEGGKVSDSQLSEMVGSEKGKIVPTDIGMIVNDFLVTHFTQILDYNF
TAQVEEDFDEIASGDEDWQDMMKNFYKDFHPNVLEVEENAERASGERVLGTDPKSGRQVS
VRLGRFGPMVQIGTVDDEEKPEFASLLPDQSIGTITFEEAMTLFELPRKLGVYEGEEVEA
NVGRYGPYVRFGKKFISLAQGESAFDVDMDRAIELIKEKQKADAPIGTYEGKDVTKGKGR
FGPFIKWDGMFINVNKKYDFDNLSDGDIAELIETKKKKEAEKLIQEWPKEKIRIEKARWG
RHNIIKGKVKVELSKDVDATKITLEEAQALLEKKSPKKKAKTKSKAKK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaatttagttattgtagagtcccccgccaaagctaagaccattgaaaaattt
ctgggtaaggagtttcaagttgagtcgagttttgggcacattgccgaccttccctcaaaa
gagctcggtgttgatgtggagaatgattttaagccaaaatatactgtagataaagagaaa
aaagccttggttaaaaagctcaaggacttggccaataaagctgaaaccatttggctggca
agtgatgaggaccgcgagggggaggccatatcttggcacttggcagaagagttgggattg
gataaggacaagaccaaacgtatcgtattcaactccattaccaaatcggccatccaaaag
gccattgagaatccaagggacatcaactataatttggtaaatgcacaacaggcccgtagg
gtgttggaccgattggtgggttacgagctatcgcctgtgctttggaaaaaaataaagccg
ggactttcggcagggcgtgtgcagtccgttgcagtacgcttgatcgttgagcgggagagg
gaaattgaaggatttacgcccgaagcttcttttcgaatcaaagctgagttcaaaactcat
gagggcaatacatttggtgcaaagctgaataccacgttcccaacaaagcaagcggccgaa
tcatttttaaaggagaatattggagctgatttttcggtttccgatttggcccagaagccg
gcaaaaaaatctccggcagccccgtttaccacttccactttgcaacaggaagcttcaaga
aagctttatttttcggttagccgtaccatgcaggtggcccagcggttgtacgaagccggt
ctcatcacctatatgagaacggatagcgttaacctgtccaacgaagcattggcagccgca
aaagatgccattctggacaactatggcgaaaaatatagtcaaaccagaaactttacaggg
aaatccaaaggggcacaagaggcgcacgaggccattcgccctaccgatatgaaattacag
tcgccccaattggagcgcgaccaagcaaaattatacgagttgatttggaaacgaaccctt
gcctcgcagatgagcgatgcacagttggaacgtaccaatgttaaaataaaagcgagcacc
catagcgaagaattctccgcaaacggggaagtagtgaagttcgatggtttcctcaaagtg
tatctggaaggtaccgatgatgaagacggggaggagcaagatggaatgcttccggccatg
aaagtaggggagccgcttcaaaatgtatttatttctgcaaccgaaagattttcaaggcct
ccttaccgctattcggaagcatctttggtgaagaaactggaggagttgggcattggtagg
ccatctacctacgcacctaccatatccaccattcaaaataggggatatgtggaaaaaggt
accgttgaaggttccgagcgcaaatatgcacaactggttttggaaggcggaaaagtgtcc
gacagccaactgagcgaaatggtaggttccgaaaaagggaaaattgtccctacggatatc
gggatgatcgtaaatgactttttggtgacgcacttcacacagattctggattataatttc
acggcccaggtcgaagaggattttgatgaaatcgcatcaggtgatgaggattggcaggat
atgatgaagaatttctacaaggattttcatccgaatgtcttggaggtggaggaaaatgcc
gaacgtgccagcggagaacgtgttctgggaaccgacccaaaatcgggcagacaggtatcg
gtacgattgggacgttttggccccatggttcaaataggtacggtggatgatgaggaaaaa
cctgagtttgccagtttgttgccagatcagtccatcggaaccatcacatttgaagaggca
atgaccctttttgagcttccgcgcaagttgggggtttacgaaggtgaagaggttgaggcc
aatgttgggcgatatggcccttatgttcgatttggaaaaaaattcatttccttggcacag
ggcgaaagcgcctttgatgtggacatggaccgtgccattgagctcatcaaggaaaaacaa
aaggcagatgctcccattggcacctacgaaggaaaggacgttaccaaaggtaaaggtagg
ttcgggccatttattaaatgggacggtatgttcatcaacgtgaacaagaaatatgatttt
gacaatctatccgacggtgatattgctgaattgatcgagaccaaaaagaagaaagaggcc
gagaaactgattcaggaatggcccaaagaaaagatacggatagaaaaggcccgttgggga
agacataatataataaaaggtaaggttaaggtggaactttccaaagatgtggacgccaca
aaaatcactttggaagaagcacaggccctactggaaaagaaatcaccaaagaaaaaagcc
aagacaaaatcaaaagctaagaagtag
DBGET
integrated database retrieval system
