Flagellimonas oceani: GVT53_15690
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Entry
GVT53_15690 CDS
T06500
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
mut
Flagellimonas oceani
Brite
KEGG Orthology (KO) [BR:
mut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mut03019
]
GVT53_15690
03009 Ribosome biogenesis [BR:
mut03009
]
GVT53_15690
Messenger RNA biogenesis [BR:
mut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GVT53_15690
Ribosome biogenesis [BR:
mut03009
]
Prokaryotic type
rRNA processing factors
GVT53_15690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
UBX
DUF6305
Motif
Other DBs
NCBI-ProteinID:
QII46057
UniProt:
A0A6G7J6K7
LinkDB
All DBs
Position
3465103..3466653
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AA seq
516 aa
AA seq
DB search
MNRELIVRSTPEAVDFALLKDGKLVELHKEEDNNNFSVGDIFLAKIRKPVTGLNAAFVNV
GYEKDAFLHYHDLGPQLSSMLKFIKKARTGKLKDYSLRNFPFEKDIDKNGSINDVLKANQ
SLLVQIVKEPISTKGPRISSELSIAGRFLVMVPFSDRVSVSQKIASKEEKDRLIRLVKSI
KPKGFGVIIRTVAEGKKVAELDKDLQNLFSKWTNMSKKLQRASHPSKVLVELNRASSILR
DVFNDSFTGIHVDEETLYNQIKDYLHEIAPEKESIVKLYTGPAPIFEKFGIERQIKTSFG
RTASMSRGAYLVIEHTEALHVIDVNSGNRSNKAKNQEDTALEVNLLAATEIARQLRLRDM
GGIIVIDFIDMTKGDHRRKLFDHLRDEMKDDRAKHKILPPSKFGLVQITRQRVRPEMNIK
TSEENPNLSGAEVEAPIVLIDKIQVDLERILKRNQKINGLVLNIHPFIAAYLTKGFPSIR
SKWFKTHKKWVKIQPRDAYKYLEYSFKDKDGKKIQI
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagagaattaatagtaagatctacgccggaagcagtcgattttgccttattaaag
gatggaaaattagtagaattacacaaggaagaggacaacaacaacttttccgtaggggat
atcttcctagccaagataagaaaacccgttacaggccttaatgcagcatttgtcaatgta
ggttatgaaaaagatgctttcctgcactaccatgacctgggcccgcaactgtcctccatg
ttgaaattcattaaaaaagctagaacagggaaactcaaagattattcccttagaaatttt
ccatttgaaaaagacattgacaagaatggcagcatcaacgatgtgttgaaggccaatcag
tcattactggtacaaatagtaaaagaacccatctcaacaaaggggccaagaatcagctca
gagctttccatagccgggcgctttctggtcatggtacctttttccgatagagtctcggta
tcacaaaaaatagcgagcaaggaagaaaaggacagacttattagacttgtaaaaagtatt
aagcccaagggatttggagtaattatacgtaccgtagcagaaggcaaaaaggttgcagaa
ctggacaaagatcttcagaacttgttttccaaatggacaaacatgagcaagaaattgcag
cgggcgtcgcatccatccaaagttttggtggaactgaacagggcgtcatccatccttagg
gatgtcttcaacgattccttcacaggaatacatgttgatgaagaaacactctacaaccag
atcaaggattatttgcatgaaattgcaccagaaaaagaatccattgtaaagttgtacacc
ggtccggccccaatttttgaaaaattcgggatagagcgtcaaataaagacctcttttggc
cgaacagcatccatgagccgcggggcttaccttgttattgagcataccgaagcgttacac
gtaatagacgtaaacagtggcaatcgctccaacaaggccaaaaatcaagaggataccgcc
ctggaagtaaaccttttggccgcaaccgaaattgcaagacaattaagactgcgcgacatg
ggcggaattattgtcattgattttattgatatgaccaaaggtgaccacagacgaaagttg
ttcgaccaccttagggacgaaatgaaggacgacagggccaagcacaagattttgccgccc
agtaagtttggacttgtacagattacaagacagcgcgtacgtccggaaatgaatatcaaa
accagtgaggaaaacccgaacctatcgggtgccgaggtggaagctcccattgtcttgata
gacaagatccaagtggatttggagcgtatccttaagcgaaaccaaaaaataaacggactt
gtattgaacatacatccatttattgcggcctaccttaccaaaggattcccatctattcgt
tccaagtggttcaaaacccataaaaagtgggttaaaattcaacccagggatgcttacaag
taccttgaatatagtttcaaggacaaagacggcaagaaaattcaaatataa
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