Candidatus Methylopumilus universalis: FIT94_00270
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Entry
FIT94_00270 CDS
T10531
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
muv Candidatus Methylopumilus universalis
Pathway
muv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIT94_00270 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muv03019
]
FIT94_00270 (pnp)
03016 Transfer RNA biogenesis [BR:
muv03016
]
FIT94_00270 (pnp)
Enzymes [BR:
muv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FIT94_00270 (pnp)
Messenger RNA biogenesis [BR:
muv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FIT94_00270 (pnp)
Transfer RNA biogenesis [BR:
muv03016
]
Prokaryotic type
tRNA degradation factors
FIT94_00270 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
KH_KhpA-B
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QDC40545
UniProt:
A0AAX1EXI5
LinkDB
All DBs
Position
51477..53606
Genome browser
AA seq
709 aa
AA seq
DB search
MFKAIKKSIQFGAHTLTLETGEIARQADGAVLVSYGDTAVLVTVVGRHDVKEGQDFFPLT
VDYQEKTYAAGKIPGGFFKREARPSEKETLTSRLIDRPLRPLFPESFYNEIQIVAMVVSS
DSEIDSDIPAIIGASAALAISGIPFYGPIGAARVGYINEEYVTNPTASQLKESELDLVVA
ATDSAVLMVESEAKELPESVMLGAVLHGHKEMQAVIKMINELAKEVGKEPWDWVAPEPDK
ALIKKIHDLAAKDVHAAFQIKSKGERSAKLEEIKNKVFAKLITEDTDTAETNKIKNEFFN
LEAKTVRTQILDGEPRIDGRDTRTVRPIAIRSSVLPRTHGSALFTRGETQALVVATLGTG
RDEQTIDALQGEYSDRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRALIAVLPSKE
DFSYTMRVVSEITESNGSSSMASVCGGCLALMDAGVPIKAHVAGIAMGLIKEGNRVAVLT
DILGDEDHLGDMDFKVAGTEDGITALQMDIKITGITTEIMQVALSQAKEGREHILAIMKK
EMKGSRQELSTFAPRIITVKIHPDKIREVIGKGGSVIKALTEETGATIDIEDDGTIKIAC
VDGLQGEEAKRRILEITAEIEVGQIYEGTVIKMLDFGAIVSLLPGKDGLLHISQIAHQRV
NAVTDFLSEGQKVKVQVIEVDDKGRVRVSAKALIEPPPTEEKAESKKED
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagcaattaagaaaagtattcaatttggtgcgcacaccttaacactggaaaca
ggcgaaatagcaagacaagctgatggcgcagtattagtaagttatggcgatacagcggta
ttagtgacagttgtaggaagacacgatgtaaaagaaggccaagatttttttccactcaca
gttgattatcaagaaaaaacatatgctgcaggtaaaattcctggcggttttttcaaacga
gaggcacgcccaagcgaaaaagagacactaacctcacgtttaattgatcgtccattacgt
cctttatttccagaaagtttctacaacgaaattcaaatcgtagcgatggtagtgtcatct
gacagtgaaattgattctgatattccagcaatcattggtgcttcagctgcattagctatt
tctggcattcctttctacggacctattggtgctgcgcgcgtcggatatattaacgaagag
tatgtgacgaatccaacagcatcacaattaaaagaaagtgaactcgatcttgtggttgcg
gcaacggattcggctgtattgatggtggaatcagaagcaaaggaattacctgaaagcgta
atgttaggcgctgtgcttcatggccataaagaaatgcaagctgtgattaaaatgattaat
gaattagctaaagaagttggcaaagagccatgggattgggttgctcctgagcctgataaa
gctctcattaaaaagattcatgatttagcggcaaaagatgtgcatgctgcatttcaaatt
aaatcaaaaggcgagcgctcagctaagttagaggaaattaaaaataaagtattcgcaaag
cttattactgaagatacagatactgctgaaactaataaaattaaaaatgaattttttaat
ttagaagcaaaaacagtgcgcacacaaattttagatggagagccacgtattgatggacgc
gatactcgcacagtcagaccgattgcaattagatcaagcgttcttccaagaactcatggt
tcagcacttttcacacgtggtgaaacacaagcgcttgtagttgctacattaggtacaggt
cgcgacgagcaaactattgatgcacttcaaggtgagtattcagatcgcttcatgcttcat
tacaatatgcctccttacgcaacaggcgaaacaggacgtgtaggcacacctaagcgtcgt
gaaattggtcatggtcgattagctaagcgtgcattgattgcagtactgccttctaaagaa
gattttagttatacgatgcgtgtcgtttctgaaattacagaatcaaatggatcaagctct
atggcatctgtatgtggcggttgtttagcattgatggacgcaggtgtcccaatcaaagcc
cacgtagcaggcattgcgatgggtcttatcaaagaaggtaatcgtgttgctgttcttaca
gatatcttaggtgacgaagatcacttgggtgatatggactttaaagtagcgggtactgaa
gacggtattacagctcttcaaatggatattaaaattacaggtatcacaactgaaattatg
caagttgcattaagccaagcaaaagaaggacgtgagcatattttggcgatcatgaaaaaa
gaaatgaaaggcagccgtcaagagctatctacatttgcaccaagaattattactgtgaaa
attcatccagataaaattcgtgaagtgatcggtaaaggtggatcagtgattaaagccttg
acagaagaaacaggtgctacgattgatatcgaagatgatggcactattaagattgcttgt
gtggatggtcttcaaggcgaagaagcaaagcgccgtattttagaaatcacagcagaaatt
gaagtaggtcaaatctatgaaggcactgtgattaagatgttagattttggcgcaattgta
tctcttcttcctggtaaagatggtttgcttcacatttcacaaattgcacatcaacgtgtg
aatgcagtgactgacttcttgtctgaaggacaaaaagttaaagtacaagtgattgaagtg
gatgataaaggccgtgttcgcgtaagtgctaaagcactgattgagcctccgcctactgaa
gaaaaagcagaaagtaagaaagaagactaa
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