Candidatus Methylopumilus universalis: FIT94_01215
Help
Entry
FIT94_01215 CDS
T10531
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
muv Candidatus Methylopumilus universalis
Pathway
muv03030
DNA replication
muv03410
Base excision repair
muv03420
Nucleotide excision repair
muv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
muv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIT94_01215 (polA)
03410 Base excision repair
FIT94_01215 (polA)
03420 Nucleotide excision repair
FIT94_01215 (polA)
03440 Homologous recombination
FIT94_01215 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
muv03032
]
FIT94_01215 (polA)
03400 DNA repair and recombination proteins [BR:
muv03400
]
FIT94_01215 (polA)
Enzymes [BR:
muv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIT94_01215 (polA)
DNA replication proteins [BR:
muv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FIT94_01215 (polA)
DNA repair and recombination proteins [BR:
muv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FIT94_01215 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIT94_01215 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
SCP2
NYN_YacP
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QDC40713
UniProt:
A0AAX1EY33
LinkDB
All DBs
Position
complement(202994..205723)
Genome browser
AA seq
909 aa
AA seq
DB search
MKTLLLVDGSSYLYRAFHGLPDLRNSHQEPTGAIYGVLNMLRKLHKEFPSDYSACVFDAK
GKTFRNDLYPEYKANRSAMPDDLRAQIQPLHEAITAMGWPIIIQEGVEADDVIGTLCKEA
TQHQFNVVVSTGDKDLAQLVNKHVTLINTMTNEKLDIEGVKNKFGLMPNQIIDYLTLIGD
TSDNVPGVEKVGPKTALKWLNEYQTLDNIVKNAAQFSGVVGENLRKSLDWIPKAKDLITI
RCDLDIDKNWDNFKPKAQDPSTLENLYQRFEFKNWLNEIKEGSYQENLSSKSSEEKISIK
SPSHFISKIKYDTIFDKDLLHIWLEKIKDKKYVCVDTETNSLDSMQAKIVGISIAVTAGE
AAYIPLAHDYPGAPDQLSVDTVLNILKPMLEDEKIKKIGQNIKYDAHVFLNHGICLKGIK
HDTMLQSYVTESHQSHGMDNLSLRHLGHTCVSYEEVAGKGVNQLRFNEVDIDVASHYSSE
DADITLQLNQFFNPAIENDAPLKFIYENIEMPAAGVLLKIERNGVLVDDKKLNIQSHEIG
KKILLLEEEAYQLAGQPFNLASPKQLQDILFNKLGIKSLKKTPSGAPSTDEEVLQDLALD
YPLPKLLLEHRSLSKLKSTYTDKLPKMINTNTGRIHTSYNQAVAITGRLASSDPNLQNIP
IRTLEGRKIREAFIANEGSSILSADYSQIELRIMAHLSQDKRLLEAFRNNEDIHKSTAAE
IFGCDLDSVSQEQRRYAKVINFGLIYGMSVFGLSKSLGIERSAASNYIETYFARYPGVKR
YMEEAKLFAKDKGYVETFFGRRLWIPEINSSNGIRRAAAERAAINAPMQGTAADLIKLAM
IAVDQWLTQNTHLKTMMIMQVHDELVFEVPQDEINILQKELPVLMEGVANLDIPLIVDIG
VGLNWDAAH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactattattggtcgatggctcatcttatctctatcgagcattccatggatta
cctgaccttagaaacagtcaccaagaacctactggggctatttatggcgtcttaaatatg
ctccgaaaactccataaagagtttccttctgattatagcgcttgcgtttttgatgcaaaa
ggaaaaactttcagaaatgatctttaccctgagtataaggccaatcgatcagcgatgcct
gatgatttaagagctcaaatccaaccgcttcatgaagcaattacagcgatgggttggcct
attatcattcaagaaggagttgaagctgatgatgtcattggtacattatgcaaggaagct
actcaacatcaatttaatgtcgtcgtttctacaggcgataaggatttggctcaacttgta
aataagcatgtcactttgattaatacgatgacaaatgaaaagcttgatatcgaaggtgtc
aaaaacaaatttgggttgatgcctaatcaaattatcgattacttaacacttattggagac
acttcagataacgtccctggcgttgagaaagtcggtcctaagactgcattgaaatggctt
aatgaatatcaaacactcgacaatatcgtaaagaatgctgctcaattctcaggtgtcgtc
ggtgaaaatttaagaaaatcactcgattggattcctaaagccaaagatcttattacgatt
cgatgcgatttagatatcgacaaaaattgggataatttcaaacctaaagcacaggatccg
tccactttagaaaatttatatcagagatttgaatttaaaaattggcttaacgaaattaaa
gaaggcagctatcaggaaaatttatcaagcaaaagtagtgaagaaaaaatatctatcaaa
tcacccagtcattttatttctaaaataaaatacgacacgatattcgacaaagatctatta
catatatggctagaaaaaatcaaagataaaaaatatgtctgtgtcgacacagaaactaac
tcacttgattctatgcaggcaaaaattgtagggatatcgatagcagtaactgctggtgaa
gcagcctacattcctttagcacatgattatcctggcgctcctgatcagttatcagttgat
actgtattaaatatacttaaacccatgttagaagatgaaaagatcaagaaaattgggcaa
aacataaagtatgatgcgcatgtttttttaaaccatgggatatgtcttaaaggtattaag
cacgatacgatgcttcaaagctatgtgacagaaagccatcaaagccatggcatggataat
ttaagcttgaggcatctaggacatacctgtgtaagttacgaagaagttgcaggcaaaggt
gtaaatcaacttagatttaatgaagtcgatattgatgtggcatctcattattcgtctgag
gatgccgacattacattgcaattaaatcaattttttaatcctgcaattgaaaatgatgcg
ccactaaaattcatttacgaaaacatcgaaatgcccgccgctggggtgcttttaaaaatt
gaaagaaatggcgtgcttgtggacgacaaaaaactaaatatacaaagtcacgaaattggt
aaaaaaattttactgcttgaagaggaggcctatcaattagcaggacaaccctttaatctc
gcatcacctaaacaattacaagatattttatttaataagctgggtattaaatctttaaaa
aaaacaccttcaggtgcgccttctacggatgaggaagtgttacaagatttagcccttgat
tatcctctacccaaattattacttgaacatcgaagtctatctaagctcaaatcaacatac
acagataaattaccaaaaatgattaacaccaacactggtcgcattcatacaagctataac
caagctgtagcaatcaccggacgtcttgcaagttcagatcctaatttacaaaatattcca
atccgaaccctggaaggcagaaaaataagagaagcgtttatagcgaatgaaggttcatct
attctatctgcagactattctcaaattgaattaagaatcatggctcatttgtctcaagat
aaacgattgcttgaagctttcaggaataatgaagacattcataaatcaacagcagctgaa
atttttggttgcgacctagacagcgtttcccaagaacaaaggcgttatgccaaggttatt
aactttggattgatatacggcatgagtgtgttcggtttatcaaaatcacttggtattgag
cgcagtgctgcctcaaattatattgagacttattttgctagatatcctggcgttaaacgt
tatatggaagaagcaaaattatttgctaaagataaaggttatgtagaaacattttttgga
agacgattatggatcccagaaattaatagttcaaatggaattagaagagctgcagcagaa
agagcggcaataaatgctcccatgcaaggcactgccgctgacctcattaagttagcaatg
attgcagttgatcaatggcttactcagaacacacacttaaaaacaatgatgattatgcag
gtacacgatgagcttgtttttgaagtccctcaagatgaaatcaatatattacaaaaagaa
ttgcctgtcttaatggagggcgttgcaaatcttgatattcctcttattgtagatatcggt
gttggtttaaattgggatgcagctcactag
DBGET
integrated database retrieval system
