Candidatus Methylopumilus universalis: FIT94_01240
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Entry
FIT94_01240 CDS
T10531
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
muv Candidatus Methylopumilus universalis
Pathway
muv03420
Nucleotide excision repair
muv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
muv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FIT94_01240
03430 Mismatch repair
FIT94_01240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
muv03400
]
FIT94_01240
Enzymes [BR:
muv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIT94_01240
DNA repair and recombination proteins [BR:
muv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIT94_01240
MMR (mismatch excision repair)
Other MMR factors
FIT94_01240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QDC40717
UniProt:
A0AAX1EY95
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All DBs
Position
complement(208609..210765)
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AA seq
718 aa
AA seq
DB search
MTLSLPNQNQFKDLNEKQIEAVTLQNESALILAGAGSGKTKVLTSRIAWLIQTNVVSPFG
LIAVTFTNKAAKEMLQRITMQLPINTRGMWVGTFHGLCNRFLKTHARDADLPETFQILDS
QDQLSLIKRTMKVMNVDDETYAPKQVQHYINGCKDEGLRAAHVDTYDTHSKKLNEIYLEY
EKQCQKEGLVDFGELLLRCYELFEKKIAIRQHYQDRFKHILIDEFQDTSELQYKWLKLLA
GSSSFVFAVGDDDQSIYSFRGARVGNMKDLERDFHVKQIIKLEQNYRSKSNILNTANAII
DHNKNRLGKNLWTSAGEGDPIRIYTGHTDIDEAKFIVDEIKMLHREGVSLNHIAILYRSN
AQSRILEHNIFSSNLPYRVYGGLRFFERAEIKHAIAYLRLIANKNDNSAFLRIVNFPTRG
IGSRSLESLQDTSRRDGCSLWDAAVKSSDQTLTIKKGLPYFVHLIKHIESGFEGLTLPQM
IDLIINESGLKDHYTNEKDGLDRVSNLNELVSAAATFLNNDNNESTNPLGDFLNYSSLES
GDMQASEGSDAIQLMTIHSSKGLEFDVVFISGLEEGLCPHEQSLFESKGLEEERRLMYVA
VTRARSKLYLSYALSRMLHGQTRFGMPSRFLEEIPENLVKNINTINFKNNVDQIEENYSQ
PSQQKHSWRIGESVMHEKFGQGTVLGYEGNADDLRIQIKFSKTGTKWLAMEYAKLFKH
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaccctatccctgcccaaccaaaatcaatttaaagatttaaatgaaaaacaaattgaa
gctgtaacacttcaaaatgaatctgcactcattctcgctggcgcagggagtggcaaaact
aaagtactcacctccagaattgcatggcttattcaaacaaatgtggtgagtccttttggc
cttatcgctgtaacatttaccaataaagccgcaaaagaaatgctgcaaagaattactatg
cagcttcccattaatacaagaggtatgtgggtaggtacattccatggtttatgtaataga
tttcttaaaacgcatgcaagagatgctgatttacctgagacgttccaaatactagatagc
caagatcagttatctctcatcaaaagaactatgaaagtcatgaatgtggacgatgaaaca
tatgcaccaaaacaagtacagcattatatcaatggatgcaaagatgagggcttaagggct
gcgcatgtcgatacttatgacacacactcaaaaaaattaaatgaaatctatcttgagtat
gagaaacaatgccaaaaagaaggtctagttgattttggtgaattgcttctaagatgctat
gaactttttgaaaaaaaaatagctattcgccagcattatcaagatcgatttaagcatatt
ctcattgatgagtttcaagacacgagcgaacttcaatataaatggttaaaacttcttgcg
ggtagcagcagttttgtgtttgctgtgggggatgatgatcaatctatctatagctttaga
ggagctagagttggcaacatgaaagatcttgaaagagatttccatgttaaacaaattatt
aagctagaacaaaactacagatctaaaagtaacattcttaataccgcaaatgccatcatt
gatcataacaaaaatagattaggcaagaacttatggacttcggctggagagggcgatcct
attcgaatttatacaggtcataccgacattgatgaggccaagtttattgtagatgaaatc
aaaatgcttcatagggaaggtgtctcgctcaatcatattgcaattctttatagaagcaat
gcacagtcgcgcattctcgaacataatattttttcatctaacctaccttatcgtgtttat
ggtggattacgtttctttgagcgtgccgaaattaaacatgctattgcttatttgagactc
attgcaaataaaaatgataacagtgcatttttaagaattgtaaattttccaacacgcggt
attggaagtcggtcattagaaagtcttcaagatacatctaggcgagatggttgtagcctt
tgggatgctgcagtgaagtcatcagatcaaacactcacaattaaaaaaggtttgccttat
tttgtccatctcatcaaacatattgaaagcggcttcgaaggattaacgcttccacaaatg
attgatcttattattaacgaatcaggactaaaggatcactataccaatgaaaaagatggt
ttagatagggtctctaacttaaatgaattagtttctgcggccgcaacctttcttaacaat
gataacaatgagtctacaaatccacttggagattttttgaattattcctctttagaaagt
ggtgatatgcaagcaagcgaaggttcagatgctattcaacttatgacgattcactcatct
aaaggattagaatttgatgtagtatttatttcaggccttgaagaaggtttatgtccgcac
gaacaaagtctcttcgaatccaaagggcttgaggaagaaagaaggcttatgtatgttgct
gtgacgagagcccgatcaaaactatacttaagctatgcattatcaagaatgctccatggt
caaacaagatttggaatgccatcaagattcttagaagaaatccctgagaatctcgtcaaa
aacattaacaccattaattttaagaataatgtagatcagattgaagagaattattcacaa
ccttctcagcagaagcattcctggcgaattggtgaatctgtaatgcatgaaaaatttggc
cagggaactgttttaggttatgaaggaaatgcggatgatttaagaatccaaattaaattt
agcaaaacaggtaccaaatggcttgcaatggaatacgcaaaactcttcaaacactaa
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