Candidatus Methylopumilus universalis: FIT94_02090
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Entry
FIT94_02090 CDS
T10531
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
muv Candidatus Methylopumilus universalis
Pathway
muv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
muv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FIT94_02090 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
muv03400
]
FIT94_02090 (xseA)
Enzymes [BR:
muv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FIT94_02090 (xseA)
DNA repair and recombination proteins [BR:
muv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FIT94_02090 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHQ_synthase
pP_pnuc_2
Motif
Other DBs
NCBI-ProteinID:
QDC41744
UniProt:
A0AAX1F214
LinkDB
All DBs
Position
complement(368471..369682)
Genome browser
AA seq
403 aa
AA seq
DB search
MNTTKPNEARVFSVKEINRLVRELLEQSFPSFWISGEISNFIIASSGHWYFSLKDDEAQV
RCTMFKNKNMAMDWTPKNGEKIEAKCFIGLYEARGEYQLNIESIRHAGAGLLSEAFNQLK
EKLLKEGLFEDSRKKSMPQFPQSIGVITSPTGAAIEDILITLKRRSPHIPVIIYPSLVQG
KEAPLAIVKAIETANLRKECDVLILARGGGSIEDLWAFNEEIVARAIVASKIPTITGVGH
ETDTTIADFVSDLRAPTPTGAAELVTSHTVELIKTIQIYKNQLNKVMAVLIREVMQKIDY
LEKRLVSPHQQIQRQKEQIHQYIQRINQSMRNALIQYRLHIDKLKLNLDHLSPHAVLSRG
YSIITNVDGQIINNVAQLKLDDKIHIQLNHGQADANISDLKDQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
ataaataccaccaaacctaacgaagcaagggttttttctgttaaagaaattaaccgtctt
gtaagggagctccttgagcaaagttttccctcattttggatttcgggtgaaatctctaat
ttcataattgcatcttcagggcactggtacttttcccttaaagatgatgaagctcaagtc
cgttgcaccatgtttaaaaataaaaatatggcaatggattggacacccaaaaatggcgaa
aaaattgaagcaaaatgttttatcggtttatatgaggcgcggggcgaatatcaactcaat
attgagtcaattagacacgcaggtgcggggcttttatcagaagccttcaatcaattaaaa
gaaaaactgctcaaagaaggtctttttgaggattcgcgcaagaaatctatgcctcaattt
cctcaatccattggggtcattacctcacccacaggggctgcaatcgaagatattttaatt
acacttaaaagacgaagtcctcatattccggtcattatttatcctagtctcgttcagggc
aaagaagcacctctcgcaattgtgaaagccattgaaactgcaaatttaagaaaagaatgt
gatgtactgatcttggcacgcggtggaggttcgattgaagacttatgggcctttaatgag
gaaatcgtagcgcgtgcgattgttgcatcaaaaatacctacaattacaggtgttggacat
gaaactgatacaacgatagctgattttgtttctgatttaagagcccccacgccgacaggc
gctgctgagctcgttaccagccatactgtcgaacttattaaaacaattcagatttataaa
aaccaattaaataaagtcatggcagttcttattcgagaagtgatgcagaaaattgattat
ctagaaaaacgtcttgtatcgcctcaccaacagattcaaagacaaaaagaacagattcat
caatatatacaaaggattaatcaaagcatgagaaatgctttgatccaatatcgtttgcac
atcgataaattaaagttaaatttggatcacttaagccctcatgctgttttatcaagaggc
tattccattattacgaatgtggatggccagattataaataatgtagcccagttaaagctt
gatgataaaattcatattcaactaaaccatgggcaagctgacgcaaatatttcagatctc
aaagatcaataa
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