Candidatus Methylopumilus universalis: FIT94_04775
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Entry
FIT94_04775 CDS
T10531
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
muv Candidatus Methylopumilus universalis
Pathway
muv00541
Biosynthesis of various nucleotide sugars
muv01100
Metabolic pathways
muv01250
Biosynthesis of nucleotide sugars
Module
muv_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
muv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FIT94_04775 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
muv01005
]
FIT94_04775 (rfaD)
Enzymes [BR:
muv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FIT94_04775 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
muv01005
]
Core region
FIT94_04775 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
QDC41364
UniProt:
A0AAX1EZY0
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All DBs
Position
907483..908466
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AA seq
327 aa
AA seq
DB search
MIILTGGAGMIGSVIAWHLNSILDRKDIIVVDDIQHQDQWNNLSKRTYIDYLDKDDLFPW
LEKKQEIEAIIHMGAISATTETDFNKLLNHNIRYSQNLWRYASDHNVPFLYASSAATYGG
GEFGYDDNEAELRKLRPLNAYGYSKQFFDQWAVQQVLAKEKTPPQWCGFKFFNVYGPNEY
HKDRMASVVFHAFNQLKTEGEIRLFKSDRPDYKDGMQLRDFVYVKDAAAVVLHFLSHKKH
SGIYNVGTGKASSFKALAESLVKSVKGDLNTIKYIDMPNDLKGKYQYFTEANIKKLKDAG
YTKPFLSIEEGVEDYAINYLTKSDTYA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgataatacttaccggtggtgctggcatgattggaagtgtcattgcttggcatctaaat
agcattctcgacagaaaagatatcatcgtcgttgatgatattcagcatcaagatcaatgg
aacaatttaagtaagcgaacatatattgattaccttgataaagatgatctatttccttgg
cttgaaaaaaaacaagaaattgaagctattattcatatgggggctatcagcgctacaact
gaaacagattttaataagcttttaaaccataatattcgttacagtcaaaatctatggcgc
tatgcaagcgatcataacgtgccttttctttatgcaagctcagcagctacttatggcgga
ggagaatttggctatgatgacaatgaagccgagctcagaaaactaaggcctctaaatgct
tatgggtattcaaaacaatttttcgatcaatgggcagtgcaacaagtcctcgcaaaagaa
aaaacacctcctcaatggtgtggatttaaattctttaatgtctatggtccaaacgagtat
cataaagatagaatggcaagcgttgtatttcatgcatttaatcaacttaaaacagaaggt
gaaattagactcttcaagagcgatcgtcctgactataaagatggtatgcaattaagagat
tttgtatatgtaaaagatgctgcagcagttgttttacattttttaagtcacaaaaaacat
tcaggtatctataatgtaggcacaggaaaagcttcaagctttaaagcacttgctgaatcg
cttgtgaaaagtgttaagggtgatctaaatacaattaaatatattgatatgccaaatgat
cttaagggaaaataccaatactttactgaagctaatataaaaaaactaaaagatgctgga
tacacaaagccttttcttagcattgaagaaggcgttgaggattacgcaataaattattta
actaaaagtgatacttacgcatga
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