Candidatus Methylopumilus universalis: FIT94_05460
Help
Entry
FIT94_05460 CDS
T10531
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
muv Candidatus Methylopumilus universalis
Pathway
muv00470
D-Amino acid metabolism
muv00550
Peptidoglycan biosynthesis
muv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
muv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FIT94_05460 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FIT94_05460 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
muv01011
]
FIT94_05460 (murD)
Enzymes [BR:
muv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
FIT94_05460 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
muv01011
]
Precursor biosynthesis
Amino acid ligase
FIT94_05460 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Shikimate_DH
NAD_binding_7
TrkA_N
Lreu_0056_like
2-Hacid_dh_C
THF_DHG_CYH_C
Pyr_redox_2
Nitro_FeMo-Co
Motif
Other DBs
NCBI-ProteinID:
QDC41491
UniProt:
A0AAX1F0Q5
LinkDB
All DBs
Position
complement(1036587..1037936)
Genome browser
AA seq
449 aa
AA seq
DB search
MSINFNKKKVLVIGLGETGQSALHFLANKECDIQAIDTRPTIDNFETIKEKFKDVKFTIG
KKFNDTIIHDVELIIISPGMSLKESYIQKALNQGIPVIGDIEMFAQVKSVSSKVIGITGS
NGKTTVTSLVGDLLKAAGISTIVGGNIGIPILNTLNQKAPEVYVLELSSYQLESTYSLAL
ETAAVLNISEDHMDRYGSMEEYAKAKYRIFNHAKNIILNREDDYLKSQINESSLTFGTHL
DEKNYGIKKNGNQYFIAKGSAEIISLEDIKLKGEHNILNVMAALALCEPFNISKDVIKKV
LSQFNAPPHRVEYVNSISGIDFYNDSKGTNVGATIAAIQSMSKPILLIAGGDGKSQNFKP
LIGPSKDKVKNISLIGKDAKIIQEVFKGGAIPTSIEKNLESAIIKSFELAKAGDVVLLSP
ACASTDMFKNYVHRGEVFKDCVSKLKNKS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaattttaataaaaagaaagtcttggtgattggtcttggagagacagggcag
tccgccctacattttttagcaaacaaagaatgcgatattcaagctattgatacaaggcca
acaattgataattttgagacgataaaagaaaaatttaaagacgttaaatttacgatcggg
aaaaaatttaacgataccattattcatgatgttgaattaattatcattagcccaggtatg
tcgttgaaagaaagttatattcaaaaggcattaaatcaaggcatacctgtaattggtgat
attgaaatgtttgcgcaagttaaatctgtgagttcaaaagtgattggcattacaggttca
aatggcaaaacgacagttacttcacttgttggggatttattaaaagcggccggcatatca
actattgtcggaggaaatattgggatccctatattaaatactttaaatcaaaaagcgcca
gaggtatatgttcttgagttatccagctatcagttggaatcgacatattcattagcgctc
gaaactgctgcagtcttaaatatttcagaagaccatatggatcgatacggatccatggaa
gagtatgctaaagccaagtataggatatttaatcatgctaaaaatattatcttaaataga
gaagacgattatctaaaatctcagattaatgaaagctctttaacattcggaactcatttg
gacgagaaaaattatggcattaaaaaaaatggtaaccaatatttcatcgcaaaaggtagc
gctgaaattatttctttagaagacattaaacttaagggtgaacataacattctaaatgta
atggctgctttggctctttgtgagccatttaatatttcaaaagatgtgatcaaaaaagta
ctaagtcaatttaacgctcccccacatcgagtcgaatatgttaactctatatcaggtatt
gatttttataatgattcaaaaggtacaaacgttggagcaacgattgctgctattcaaagc
atgtccaagccaatcttactgattgccggaggggatggcaaaagtcaaaattttaagcca
ttaataggcccatctaaggataaagtaaaaaatatttctttgattggtaaggacgcaaaa
ataatacaagaagtatttaagggtggggccattccaacaagtattgaaaaaaatcttgaa
tcagcaattatcaaatcatttgagcttgctaaagcgggagatgtagttcttctctctcca
gcatgtgcaagtaccgatatgtttaaaaattacgtacatcgcggtgaagtttttaaggat
tgcgtgagtaagttaaaaaataaatcatga
DBGET
integrated database retrieval system
