Mucilaginibacter sp. cycad4: SNE26_12345
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Entry
SNE26_12345 CDS
T10709
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
muy Mucilaginibacter sp. cycad4
Pathway
muy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNE26_12345 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muy03019
]
SNE26_12345 (pnp)
03016 Transfer RNA biogenesis [BR:
muy03016
]
SNE26_12345 (pnp)
Enzymes [BR:
muy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SNE26_12345 (pnp)
Messenger RNA biogenesis [BR:
muy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SNE26_12345 (pnp)
Transfer RNA biogenesis [BR:
muy03016
]
Prokaryotic type
tRNA degradation factors
SNE26_12345 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WPV02569
LinkDB
All DBs
Position
complement(3071891..3074023)
Genome browser
AA seq
710 aa
AA seq
DB search
MSLNVIKKVIDLGDGRTIEIETGKLAKQADGSVVVKMGDTMLLATVVSSPEAKEGVDFLP
LSVDYQEKYAATGRIPGGFLRREARLSDYEVLISRLVDRALRPLFPEDYHADTQVMISLI
SADKDIMPDALAGLAASAALSVSNIPFNGPISEVRVAKIDGQLVINPTLSQLENATLEFI
VAGSEHDINMVEGESKEIQEAELVEAIKFAHTAIKLQCLAQKELTIEVGKTEKRVYSHEH
SNEDLKKAIYAATYDQVYAIASAASAKEERSAKFKEVRDAYIETLGEIDDITKGLAKKYY
HDVEYDAIRNLVLDEGKRLDGRTTTQIRPIWSEVGYLPSAHGSAVFTRGETQSLTTVTLG
AKDDEQMIDGAFINGYQKFLLHYNFPGFSTGEVRPNRGAGRREIGHGNLAMRSLKQVLPS
EDENPYTIRVVSDILESNGSSSMATVCAGTLALMDAGVKIKEPVSGIAMGLITNEMGTKY
AILSDILGDEDHLGDMDFKVTGTKNGIVAVQMDLKINGLSYEVLTNALNQAKDGRLHILG
EMAKTITEARADYKPHAPRIVTIKIDKEFIGAVIGPGGKIIQEMQRETGATISIEEKDNQ
GIVQVFADNKASIDAALGRIRAIASKPEVGEIYEGKVKSIMPFGAFVEIMPGKDGLLHIS
EIDHRRIETMDGIFQIGDEVRVKLLDVDKQGKLKLSRKVLLPKPEPKQSN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaacgtaattaaaaaagttattgatctgggcgacggacgcaccattgagatc
gaaacaggtaagctggccaaacaagcggatggctcggtagtagtgaaaatgggtgatacc
atgttgcttgctactgttgtatcatcgcctgaagctaaagaaggtgttgacttcttgcca
ttatctgttgactaccaggaaaaatacgctgcaacaggccgtatcccgggtggtttttta
cgccgcgaggcccgtttatcagactatgaggtattgatctcacgtttggttgaccgtgct
ttgcgtccattattccctgaagattatcacgctgatacacaagtgatgatctctttaata
tctgccgataaagatatcatgcccgatgcattggccggtttggcagcatctgcagcttta
tctgtatctaacattccttttaacggccctatctctgaagtacgtgttgctaaaattgac
ggccagttagtaattaaccctactttaagccagcttgaaaatgcaactttagaatttatt
gttgcaggcagcgagcatgatatcaacatggttgagggcgaatcaaaagaaattcaggaa
gctgaattggttgaagccatcaaatttgcccacactgctatcaaacttcaatgtttagct
caaaaagaactgaccattgaagttggtaaaaccgaaaaacgtgtttacagccatgagcac
agcaacgaggatttgaaaaaagccatctacgccgctacttatgaccaggtttacgctatt
gcttcggctgcgtcggcaaaagaagagcgtagtgctaaatttaaagaagtacgtgatgct
tatatcgaaactttaggcgagattgatgatatcaccaaaggccttgccaaaaaatactac
cacgatgtggagtatgatgctatccgtaaccttgtattagacgaaggtaaacgtttagac
ggtcgtactactacgcagatccgcccgatatggagcgaagttggttatttgccatctgct
cacggttcggctgtatttacccgtggcgaaactcagtcattaactaccgttaccttaggt
gctaaggatgatgagcaaatgattgacggtgctttcattaacggataccaaaaattcctg
ttacactacaatttccctggtttttcaaccggtgaggttaggcctaacaggggtgccggc
cgccgcgaaattggtcatggtaacctggctatgcgttcattgaaacaggtattaccatct
gaagatgaaaacccatacactatccgtgtagtttctgatattttggaatcaaacggttcg
tcatcaatggctactgtttgtgccggtacactggcgctgatggatgccggtgttaaaatt
aaagagcctgtatcaggtattgctatgggcttgatcaccaacgaaatgggtaccaaatat
gctatcctttctgatatccttggtgatgaagaccacctgggtgatatggactttaaagta
acaggtactaagaacggtatcgttgcagtacagatggacttaaagatcaacggcctttca
tatgaagtattaaccaacgcgttaaaccaggctaaagacggtcgtttacacatccttggc
gaaatggctaaaaccattaccgaggctcgtgccgattacaagccacatgctccgcgtatt
gttaccatcaaaattgataaagaatttattggtgcagttatcgggcccggtggcaaaatc
atccaggaaatgcaacgcgaaacaggcgccactatttctatcgaagaaaaagacaaccag
ggtattgttcaggtatttgccgataataaagcatctatcgacgctgctttgggccgcatt
cgcgccatcgcttcaaaacctgaggtaggcgaaatttacgaaggtaaagtaaaatcaatc
atgccgtttggtgcatttgttgagatcatgcctggtaaagatggcttgctgcacatatct
gaaattgatcaccgccgtattgaaactatggatggtatcttccagataggtgacgaagtg
agggtaaaactgcttgatgtagataaacaaggtaaactgaagttatcgcgcaaggtttta
ttaccgaaaccggagccaaaacaaagcaactaa
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