Mucilaginibacter sp. cycad4: SNE26_13000
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Entry
SNE26_13000 CDS
T10709
Name
(GenBank) 3'-5' exonuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
muy Mucilaginibacter sp. cycad4
Pathway
muy03420
Nucleotide excision repair
muy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
muy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SNE26_13000
03430 Mismatch repair
SNE26_13000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
muy03400
]
SNE26_13000
Enzymes [BR:
muy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SNE26_13000
DNA repair and recombination proteins [BR:
muy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SNE26_13000
MMR (mismatch excision repair)
Other MMR factors
SNE26_13000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
PcrA_UvrD_tudor
ResIII
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
WPV02700
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Position
3248134..3250419
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AA seq
761 aa
AA seq
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MDYLQGLNPEQRAAVEQTEGPVMIIAGAGSGKTRVITYRVAHLIRKGVDSFNILVLTFTN
KAAREMRERITHVVGTEAKNIWMGTFHSVFAKILRVEAEKIGYPSNFTIYDTDDSKSVLR
AILKEMNLDDKLYNVNFVLNRISASKNNLISWQEYNKNEQIQADDFSSGRGQMGKIYEMY
ATRCYRAGAMDFDDLLYKTNELLKLHPDVLNKYQHKFKYLMVDEYQDTNFSQYLIVKKLA
AVNENLCVVGDDAQSIYAFRGANIQNILNFEKDYPDLKVFKLEQNYRSTQNIVNVANSII
RNNKDQLKKNVFSEKESGDKIKVMRAFSDNEEGKIVAEAIMQDRSSNGLKWSAFAILYRT
NAQSRSMEEALRKLGIPYKIYGGLSFYQRKEIKDLIAYFRLTFNPNDEEALKRVINYPKR
GIGDTSVDKIIVSADQHGITPWEVIVEPGKYLEGKISGAVATFATMIQSFQVLTKTKSAY
ESALYIAQHSGLLKDLYEDKSVEGLNRYENIQELLNGIKEFSEREDIEEKGLDIFMQDVA
LLTNDDKDKNKDAETVSLMTIHSSKGLEFPQVYVVGLEENLFPSQMSLNSRSDLEEERRL
FYVAVTRAESKLHISYATSRFKFGTLINCEPSRFLDEIDAKYLELDYTAKPASGNSPFFD
DERKAWSRDKQPDTFSRPKPAAAAPVKTTSILAKAHVPSANFKPSDTSNLQVGMEVEHER
FGFGKVLALEGNKPDIKATIFFKEIGQKQLLLKFAKLYIVQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttacagggtttaaatcccgaacaaagggcagcggttgagcaaactgagggg
ccggtgatgatcattgccggtgccggatcgggcaaaacacgtgttattacctatcgcgtg
gcgcatttgatacgcaagggtgttgattcatttaacatactggtacttacctttaccaac
aaggctgcccgcgaaatgcgcgagcgtatcacccacgtagttggtaccgaagccaaaaat
atatggatgggcaccttccactcggtgtttgccaaaatattacgggtggaggccgaaaaa
attggctatcccagcaatttcaccatttacgatactgacgacagcaaaagcgttttaagg
gccattttaaaagaaatgaaccttgacgataaactgtataatgtaaactttgtacttaac
cgtatctcggcgtcaaaaaacaacctgatctcctggcaggaatataacaagaatgagcag
atccaggccgacgatttttcgagcggccgcgggcaaatgggcaaaatttatgagatgtat
gctacccgctgctaccgtgccggcgcaatggactttgacgatttgttgtacaaaaccaac
gaactgctgaaactgcaccccgatgtgctcaataaataccagcacaaatttaaatacctc
atggttgatgagtatcaggataccaacttttcgcagtacctgattgttaaaaaactcgct
gccgttaacgaaaacctttgtgttgtgggcgacgatgcgcaaagtatctatgctttccgc
ggtgcaaatatccaaaacatcctcaattttgaaaaggattatccggatctgaaggtgttt
aaactggagcaaaactaccgctcaacccaaaacattgtgaatgtagccaacagcatcatc
cgcaataataaagaccagcttaaaaaaaacgtattctccgaaaaagaatcgggtgataag
atcaaggtgatgcgcgccttcagtgataacgaggaaggcaaaatagtagccgaagccatt
atgcaagaccgcagctcaaacgggcttaaatggtcggcatttgccatcctttaccgtacc
aatgcgcaatcacgctccatggaggaggctttacgcaaactgggcatcccgtataaaata
tatggaggcttgtcgttttatcaacgtaaggagattaaagacctgatagcctatttcagg
ctcacctttaatcctaacgatgaggaagccttaaaacgtgttatcaattaccccaaacgc
ggtattggcgacacatcggtcgataagatcattgtatcagccgatcagcatggtataaca
ccatgggaagttattgttgagccgggcaaatacctcgagggcaaaatatccggcgcggta
gccacctttgctaccatgatccaaagcttccaggtgctgaccaaaaccaagtctgcctat
gaatcggctttatatatcgcccagcattcgggcttattgaaggacctttatgaagataaa
tcggtagaggggcttaaccgttacgaaaatatccaggagcttttaaacgggatcaaggag
ttttcagaacgcgaggatattgaagaaaaaggccttgatattttcatgcaggatgtagcc
ctgcttaccaacgatgacaaggataaaaacaaggatgccgaaacggtatcgctcatgacc
atccactcctcaaaagggcttgagtttccgcaggtttatgttgtgggactggaagaaaac
ctgttcccgtcgcaaatgtcgcttaattcacgcagcgaccttgaagaagagcgccgatta
ttttatgtagccgttacccgtgcagaaagtaagctccatatcagttatgccacttcacgc
tttaagtttggaacattaatcaattgcgagccaagccgcttcctggatgaaattgatgca
aaataccttgaactcgattataccgccaaaccagcttcaggtaacagcccattttttgat
gatgagcggaaagcatggagcagggataaacaacccgacacattttcgcggccaaaaccg
gcagctgctgccccggtaaaaaccacttccatactggccaaggcacacgtaccctcggcc
aatttcaagccttctgatacttccaatttacaagtgggtatggaggttgaacacgagcgt
tttggctttggtaaagtacttgctcttgagggaaataaacccgatataaaagccaccatc
ttctttaaggagattggtcaaaagcagttgttattaaaatttgcgaaactttacatagtt
cagtaa
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