Mucilaginibacter sp. cycad4: SNE26_13145
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Entry
SNE26_13145 CDS
T10709
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
muy Mucilaginibacter sp. cycad4
Pathway
muy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNE26_13145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muy03019
]
SNE26_13145
03400 DNA repair and recombination proteins [BR:
muy03400
]
SNE26_13145
Enzymes [BR:
muy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SNE26_13145
Messenger RNA biogenesis [BR:
muy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SNE26_13145
DNA repair and recombination proteins [BR:
muy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SNE26_13145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HTH_9
Motif
Other DBs
NCBI-ProteinID:
WPV02727
LinkDB
All DBs
Position
complement(3277986..3279881)
Genome browser
AA seq
631 aa
AA seq
DB search
MIIEEILKQYWNHDTFRPMQAEIIQSVLLGNDTLALLPTGGGKSVCFQVPALAKEGVCIV
ISPLVALMKDQVENLRAKGINAISIVSGMGRREIDLALDNCIYGSVKFLYLSPERLLSEL
VRERVKYMKVNLFAIDEAHCISQWGYDFRPPYLHIADLRKLHPNVPVLALTATATADVKA
DIQEKLKFKNPVVYQQSFERRNISYVVQHEEDKFRKMLNIVRSVKGSGIVYVRSRKETFE
IAKFLTDNGIRADYYNAGLTIDQRAEKQEAWKNNRVQVIVATNAFGMGIDKPDVRFVIHK
DIPESLEAYYQEAGRGGRDGNKAFGVLLYTPADKLKQEKMYELNFPSVEEIKQVYHNLAN
YYQVAYEAGEGLSFDLDLGEFCSRFKLDAIKTLNALKFLERDEYLAFNESVFLPSRFQFE
VVNEQLYNFQIQNAGWDPFIKTLLRSYGGAFENYVRIKEFDIARRTGLSVQQVIEGMLQL
QQYGLLSYMQQTDKPQVTYLKPRVQGSHLIIDRKYIEQRKEVYRQKMEAVFAYAIHKRCR
SQMLLAYFDEPDGRKCGVCDVCLEEKRRVNQDEIFDNITTEIVQLLSISNPDIGGLITGI
NIGTEKEKMEAVRLLLDAGKIKTDGEAYYLS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgataatcgaagaaatattaaaacagtactggaaccatgataccttcagacctatgcag
gccgagatcatccaatctgttttattggggaacgatacattggcgcttttgcccaccggc
ggcggaaaatcagtttgtttccaggtgccggcattggctaaagagggtgtatgcattgtg
atatcaccgcttgttgccctgatgaaagaccaggttgaaaacttgcgggccaaagggatc
aatgccatatccatagtatcgggcatggggcgccgtgagatagacctggcgctggataat
tgcatttacgggtcggtgaaattcctgtacctgtcgcctgagcgcctattaagcgagctg
gtgcgtgaacgggtaaagtacatgaaagtgaacctgtttgccattgatgaggcgcattgt
atctcgcagtggggctatgatttcaggccgccgtatttgcatatcgccgatttaaggaaa
ctacacccgaatgtgccggtgcttgcactcacggctacagcaacggctgatgttaaggcc
gatatccaggaaaaactaaaattcaagaacccggtagtttatcagcaaagttttgaacgg
cgcaatatcagctatgtggtgcagcatgaggaagataagttccggaaaatgctgaatatt
gtacgcagcgttaagggaagcggcattgtatatgtacggagcagaaaagaaacgtttgag
atagcaaagttcctgacagataacggcataagggctgattattataacgcaggactgact
attgatcagcgtgccgaaaagcaggaggcctggaaaaataaccgggtacaggttattgta
gctaccaatgcttttggcatggggatagataagccggatgtaaggtttgtgatccataag
gatatccctgaaagcctggaagcttactaccaggaggccggtcggggcgggcgcgatggt
aacaaggcgtttggggtattgctatatacccctgccgacaagcttaagcaggaaaagatg
tatgaacttaattttccatctgttgaggagattaagcaggtataccataacctggccaat
tactaccaggtagcctatgaggccggcgagggactgagctttgatcttgacctcggcgaa
ttttgcagccgctttaagctcgatgctattaaaacgcttaacgcccttaagtttttggag
cgcgacgaatacctggcttttaacgagagcgtatttttgccctcgcgtttccagtttgag
gtagttaacgaacaattatacaacttccagatccagaacgcaggctgggatccattcatc
aaaaccctgctgcgttcctacggaggcgcgtttgagaattatgtgcgcattaaggagttt
gatattgcaaggcgaacaggcttaagcgttcagcaggttattgaagggatgttacaattg
cagcaatatggcttgttaagctatatgcagcaaaccgataaaccccaggttacttactta
aagccgcgtgtacaaggaagtcatctcattatcgataggaaatatattgagcagcgcaag
gaggtttaccgtcaaaaaatggaagcggtttttgcctacgctattcataaacggtgccgg
agccagatgttgctggcttactttgacgagcctgatggccgcaagtgtggcgtctgcgat
gtttgtcttgaagaaaaacgccgggtaaaccaggacgagatcttcgataatatcaccacc
gaaatagtgcaactgctcagtatctcgaacccggacattggcggcctgataaccgggatc
aacattggtaccgaaaaggaaaaaatggaagccgtacgcctgctcctcgatgccggaaag
attaaaactgatggtgaggcttattatttgagttga
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