Mucilaginibacter sp. cycad4: SNE26_13290
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Entry
SNE26_13290 CDS
T10709
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
muy Mucilaginibacter sp. cycad4
Pathway
muy03030
DNA replication
muy03430
Mismatch repair
muy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
muy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SNE26_13290
03430 Mismatch repair
SNE26_13290
03440 Homologous recombination
SNE26_13290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
muy03032
]
SNE26_13290
03400 DNA repair and recombination proteins [BR:
muy03400
]
SNE26_13290
Enzymes [BR:
muy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SNE26_13290
DNA replication proteins [BR:
muy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SNE26_13290
DNA repair and recombination proteins [BR:
muy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SNE26_13290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
DUF7508
RNase_H_2
RCC1_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WPV02756
LinkDB
All DBs
Position
3315065..3316429
Genome browser
AA seq
454 aa
AA seq
DB search
MYAIVDIETTGGHASANGITEIAICIHDGKKIVKRFETLVNPQREIPIYISALTGITNEM
VREAPPFEDVAADIYHLIHGKIFVAHNVNFDFSFVRYHLAAAGYDLQTNKLCTVRLGRKI
LPGLPSYSLGRLCKHLGIDNQSRHRAMGDAEATAELFTLLLNSDTDNHIKQSLKQGSKDQ
VLPPNLPKKDVDQLPYTPGVYYFHDQKGKVIYVGKAKNLKKRVSSHFTGNNPGLQRQEFL
RNIHQVSYQVCGTELIAFVLEAIEIKRLWPKYNRSLKRFENAFCLYAFEDQRGYIRLAVD
KYRKYSDPIYTCNSLLDGYNLLNKLIEAFDLCPKLCFIQKNNEPCISAAGSSCACEGIEP
PDSYNEKVNNAIDQLKQALPTYAIRDEGRTGDEHSCILVEKGQFYGMGYISHYFDADNVQ
QLKSYLTPYPGNDYIKNIVATYASKYPDRMVVFG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaattgtcgatatagaaaccacaggggggcatgccagcgctaatggtattact
gaaatagccatatgcatacacgatggtaaaaaaatagtgaaacgatttgaaacgcttgta
aacccgcagcgtgaaatccctatctacatcagcgccttaaccggtattaccaatgagatg
gtaagggaagcccctccttttgaggatgtggcagcagacatttatcacctcatccacggc
aagatctttgttgcccacaatgtaaactttgatttttcttttgtaaggtaccatctcgct
gctgccgggtatgatctgcaaaccaataagctttgtaccgtaaggctcggtcgtaaaata
ttaccgggattaccctcatacagcctgggccggctatgcaaacatctgggcatagataac
caaagccgccacagagctatgggcgatgccgaagctactgccgaactgtttaccctgttg
ctgaacagcgatacggataaccatatcaaacaatcccttaagcagggctcaaaagaccag
gtattgccgcccaatcttcctaaaaaggatgtggaccagctaccttacacaccgggcgta
tattactttcatgatcaaaaagggaaagtaatatacgtaggtaaagctaaaaaccttaaa
aaacgggtaagcagtcattttacaggtaataatccgggattgcaacgccaggagtttttg
cgtaacattcaccaggtaagctaccaggtttgcggtactgaacttatcgcttttgtattg
gaagccatcgagatcaaacgcctgtggccaaaatataaccgttcattaaaacgctttgaa
aacgctttctgcctttacgcttttgaagatcagcgcgggtacattcgtttggcagttgat
aaataccgcaaatacagcgacccgatatatacctgcaactccctgcttgacgggtataac
ctgctcaacaaactgatagaagcatttgacctgtgccctaagctttgctttatacaaaaa
aacaatgagccatgcatcagcgcagccggaagtagttgcgcctgcgaggggattgaacct
cccgacagctataatgaaaaggtcaacaatgccattgatcagcttaaacaggctttaccc
acttacgccatcagggatgaaggccgtaccggcgatgaacatagctgtattttggttgag
aaaggccagttttatggtatgggctatatctcccattattttgatgccgataacgtgcag
caactcaaaagctatctcacaccctacccgggaaatgattatatcaaaaatattgtagct
acctacgcatctaaatatccggacagaatggtggtgtttggatag
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