Mucilaginibacter sp. cycad4: SNE26_19845
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Entry
SNE26_19845 CDS
T10709
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
muy Mucilaginibacter sp. cycad4
Pathway
muy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNE26_19845 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muy03019
]
SNE26_19845 (groL)
03110 Chaperones and folding catalysts [BR:
muy03110
]
SNE26_19845 (groL)
03029 Mitochondrial biogenesis [BR:
muy03029
]
SNE26_19845 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
muy04147
]
SNE26_19845 (groL)
Enzymes [BR:
muy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SNE26_19845 (groL)
Messenger RNA biogenesis [BR:
muy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SNE26_19845 (groL)
Chaperones and folding catalysts [BR:
muy03110
]
Heat shock proteins
HSP60 / Chaperonin
SNE26_19845 (groL)
Mitochondrial biogenesis [BR:
muy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SNE26_19845 (groL)
Exosome [BR:
muy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SNE26_19845 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SNE26_19845 (groL)
Exosomal proteins of breast cancer cells
SNE26_19845 (groL)
Exosomal proteins of colorectal cancer cells
SNE26_19845 (groL)
Exosomal proteins of bladder cancer cells
SNE26_19845 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
WPU98280
LinkDB
All DBs
Position
4911232..4912863
Genome browser
AA seq
543 aa
AA seq
DB search
MAKQVKYNVEARDALKRGVDILANAVKVTLGPKGRNVIIDKKFGSPAITKDGVTVAKEIE
LKDALENMGAQMVKEVASKTADIAGDGTTTATVLAQAIVTAGIKNVAAGANPMDLKRGID
KAVAAVVENLKSQSQTVGEDNNKIKQVASISANNDEVIGSLIAEAMEKVGKDGVITVEEA
KGTETEVKTVEGMQFDRGYLSPYFVTNADKMEAELENPFILIYDKKISSMKELLPILEKQ
VQTGKPLLIIAEDLDGEALATLVVNKIRGSLKVAAVKAPGFGDRRKAMLEDIAILTGGTL
ISEERGYKLENADLSYLGTAEKIVIDKDNTTIINGSGSAEEIKGRVSQIKSQIESTTSDY
DREKLQERLAKLSGGVAVLYVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVAFI
RAVAALADLKGDNEDENTGIQIIRRAIEEPLRQICENAGIEGSIVVQKVKEGTADFGYNA
RTDKYENLIAAGVIDPTKVGRVALENAASIAAMLLTTEVVLADDPEDEKAGAPPMGGGMG
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaagttaaatacaatgttgaagcacgcgacgccttaaaacgcggtgttgat
atccttgctaacgcagtaaaagtaaccttaggccctaaaggccgtaacgtaattatcgac
aaaaaatttggctcaccggccatcactaaagacggtgttactgtagctaaagaaattgaa
ttaaaagatgcccttgaaaacatgggcgcacaaatggttaaagaagtagcttcaaaaact
gccgatattgcaggtgatggtactactactgctaccgttttagcccaggctattgtaaca
gcaggtattaaaaacgtagctgccggtgcaaacccgatggatttgaaacgcggtatcgac
aaagctgttgctgcggttgttgaaaacctgaaatcacagtcacaaaccgttggtgaagac
aacaacaaaatcaaacaagttgcttctatctctgcaaataacgatgaggttatcggttcg
ttaattgctgaagcaatggaaaaagttggtaaagacggtgtgatcactgttgaagaagca
aaaggtaccgaaactgaagttaaaactgtagaaggtatgcagtttgaccgtggttacctt
tctccatacttcgtaaccaatgctgataaaatggaagcagaattagaaaaccctttcatc
ctgatctacgacaagaagatctcttcaatgaaagaattgcttcctatccttgaaaaacaa
gtacaaaccggcaaaccattattgatcattgccgaggatcttgacggcgaagctttagct
actttggtagttaacaaaatccgtggctcattgaaagttgctgctgttaaagctccaggc
tttggtgaccgtcgtaaagccatgttagaggatatcgcaatccttaccggtggtacttta
atctctgaagaaagaggttataaattagagaacgctgaccttagctacttaggtactgct
gaaaaaatcgttatcgacaaagataatactactatcatcaatggttctggttctgccgaa
gagatcaaaggccgcgtaagccagatcaaatctcagatcgaatcaacaacttctgattat
gaccgcgaaaaattacaagagcgcttagccaaattatctggcggtgttgctgtactttac
gtaggtgctgctaccgaagttgaaatgaaagagaaaaaagatcgtgttgacgacgcgcta
cacgctacacgtgccgctgttgaagaaggtatcgtagccggtggtggtgttgctttcatc
cgcgcggttgctgctttagctgaccttaaaggtgataacgaagacgaaaacactggtatc
cagatcatccgtcgcgctatcgaagagcctttacgtcagatctgcgaaaacgcaggtatc
gaaggttcaatcgttgtgcaaaaagttaaagaaggcactgccgactttggttacaatgca
cgtaccgataaatatgaaaacctgattgctgcaggtgttatcgacccaactaaagtaggt
cgtgtagctttagaaaacgcagcttcaattgcagctatgttgttaacaacagaagttgta
ttggctgatgatcctgaagatgaaaaagcaggcgctccaccaatgggtggcggcatgggc
ggtatgatgtaa
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