KEGG   Mucilaginibacter sp. cycad4: SNE26_22525
Entry
SNE26_22525       CDS       T10709                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
muy  Mucilaginibacter sp. cycad4
Pathway
muy03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:muy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    SNE26_22525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:muy03400]
    SNE26_22525
DNA repair and recombination proteins [BR:muy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SNE26_22525
SSDB
Motif
Pfam: Ku DUF4385 Tim44
Other DBs
NCBI-ProteinID: WPU98794
LinkDB
Position
5533457..5534227
AA seq 256 aa
MRSIWKGSIGFGLVSIPVKLYSAVQTSSLDFDMLDSRDHARIRFQRVNENTHKEVPYDKI
VKGYKLDEDYVIMDEQDFEDAAPEKSKVIEIESFVDIIDVNPMFYETSYYTEPDTKNNKA
YALLIQALTQSKKAGLARFVLRSTESLCIVHPLKNVLVVTRIRFGQEIRGTEDLNLPDKI
DVSKKELDMGLTLINQYAEDFDVSKFKDEYNDELLKIIEAKSKGKRAKVKKLKPRKTGSD
DLYDQLMASLKTRKEA
NT seq 771 nt   +upstreamnt  +downstreamnt
atgagatcgatatggaaaggttcgataggttttggattggtgagcatccctgttaaattg
tattcggcagtgcaaaccagctcgcttgattttgatatgctggatagccgtgaccatgca
cgcatccgtttccagcgggtaaacgaaaatacccataaggaagtaccttatgataaaatt
gtaaaaggctataagcttgatgaagattacgtgatcatggacgaacaggattttgaggat
gcggcccccgaaaaaagcaaggtaattgaaattgaaagctttgtagatattatcgatgta
aaccccatgttttacgaaacatcgtactataccgagcccgataccaaaaacaataaagcc
tatgccttgcttatccaggcgcttacacaatcaaaaaaagccgggctggcccgtttcgtg
ttacgaagcaccgaaagcctttgcatagttcatccgcttaaaaatgtgctggtggtaacc
cgcattcgttttgggcaagagattcggggcacagaggatcttaacctacccgataagatt
gatgtaagtaaaaaagaattggatatgggcctcaccctcataaaccagtacgccgaagat
tttgatgtatctaaatttaaagatgagtataacgatgagctgcttaagatcatcgaggcc
aaatcaaaagggaaacgcgccaaagttaaaaaacttaaaccgcgtaaaaccggcagcgac
gacttatacgaccaattgatggccagtttaaaaaccaggaaagaagcttag

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