Mucilaginibacter sp. cycad4: SNE26_24215
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Entry
SNE26_24215 CDS
T10709
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
muy Mucilaginibacter sp. cycad4
Pathway
muy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
muy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SNE26_24215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
muy03021
]
SNE26_24215
Transcription machinery [BR:
muy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SNE26_24215
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
WPU99122
LinkDB
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Position
complement(5886296..5887156)
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AA seq
286 aa
AA seq
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MRALVISAAITRRDDDALGRYFHEIEKKTVVSVTEEEQLCRRIANGDKVALSQLVTANLR
FVISVAKQYQTRGISLSDLISEGNIGLIRAAERFDHTKGFRFITYAVWYIRQAVVSAIEQ
QTRFIHLPLNQVSLINKYMQALSKLEQSSGCGASVGEISAVLGIEEQSLSELLIQSQAIT
SLDRPLVSDSAITLCDLVPQDDECPDAALLRESVKIEVEEALKTLPRREREVLTLHFGLG
GNNPKRLEEIAEIFKLSVEHTRRIKDKALEKLRLSSAGPALKSCLS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagggcacttgtaatttcagccgcgatcacgcgtcgtgatgacgatgcactggggcgg
tactttcacgaaatcgaaaaaaagactgtcgtcagcgttacggaagaagaacaactatgc
cggcgaatcgcaaacggagacaaggttgccttgtctcaacttgtcaccgccaatcttcgt
tttgtcatctcggtagccaaacaatatcaaacaagagggatcagccttagtgatctgatc
agcgaaggaaacattggcctcatccgggccgcagagcggttcgaccacaccaagggtttt
cgttttatcacttatgccgtctggtatatcaggcaggctgtcgtcagcgcgatcgaacaa
cagaccaggtttatacatttacccttgaatcaggtctcgctaatcaataaatatatgcag
gccttatcaaaattggaacagtccagcggatgcggagcttcggttggagaaatttcagca
gtgcttggcatcgaagaacaaagcctgtcggaactgttgatccagagccaggccataact
tcattggaccggccgcttgtttcagattcggccattacactttgtgatctcgtaccacag
gatgacgaatgcccggacgctgcgctattgcgggaatctgttaaaatagaagttgaggag
gcattgaaaactttacctcgtcgggaacgggaggttttaacgctacactttggccttgga
ggcaataacccgaaaagactggaagaaattgcagaaatatttaagctatcggttgagcat
acgcgaaggatcaaagataaagcattggaaaagcttcgcctttcttcagctggtcccgcc
ttaaaaagctgcttgtcgtga
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