Mumia sp. ZJ1417: H4N58_02705
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Entry
H4N58_02705 CDS
T06740
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
muz
Mumia sp. ZJ1417
Pathway
muz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H4N58_02705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muz03019
]
H4N58_02705
03009 Ribosome biogenesis [BR:
muz03009
]
H4N58_02705
Enzymes [BR:
muz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H4N58_02705
Messenger RNA biogenesis [BR:
muz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H4N58_02705
Ribosome biogenesis [BR:
muz03009
]
Prokaryotic type
rRNA helicases
H4N58_02705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
HEM4
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
QMW66884
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All DBs
Position
571565..573340
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AA seq
591 aa
AA seq
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MTDSAPTEAHPSFADLLADERLVRALADVGYESPSPIQAEAIPPLLAGHDIIGMAQTGTG
KTAAFALPILSGIDVTNPTTQALVLAPTRELALQVAEAFASYAKHLPGLNVVPVYGGAGY
SEQLAALRKGAHVVVGTPGRVIDHLERGRLDLTTISNLVLDEADEMLKMGFADDVERILR
DTPTTKQVALFSATMPSTIRRLANQYLTDPVEVKVQAKTVTAKNVRQRWLLVPHFRKLDA
LARFLEVEPHEGVIVFVRTKQVTEELAEQLRAYGHSAQAINGDLVQAQRERAVNALKSGS
LDILVATDVAARGLDVDRVSHVVNYDIPHDPEAYVHRIGRTGRAGRSGDAILFVTPRERR
LLGVIERTTGQPVTPMDIPTAEQVNARRVEQFEEAITDALATKDVHMFRGLVSKYAEATG
VDPIDVAAALAVRAHEGRSFLLDAKDDIVLSERDRARDHGDRGDRPERPQRPTPDGMAVY
RLAVGKRQRVTPKSIMGALANEGGLGRSDFGNISIRFDHSLVELPDPLPSGTESALSRTR
IGGDLINLERDRGARRSGSSSAPRRSGGGRSWDNAGKGPVRSARTPRRRKG
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgactgattccgcgccgactgaagcgcacccttcttttgctgatcttctcgccgacgag
cgactggtccgcgcccttgccgacgtcggctacgagtcgccgtcccccatccaggccgag
gcgatcccgccactgctcgcaggccacgacatcatcggaatggcacagacgggcacgggc
aagaccgctgcgttcgcgctgccgatcctctcgggcatcgacgtgacgaaccccacgacc
caggcgctcgtgctggcaccgacccgtgagctcgcgctccaggtcgccgaggccttcgcc
tcgtacgccaagcacctccccgggctcaatgtggtccccgtctacggcggtgcgggctac
tccgagcagctcgccgcgctccgcaagggcgcccacgtcgtcgtgggcacgccgggtcgc
gtgatcgaccacctcgagcgcggacggctcgacctgacgacgatctcgaacctcgtcctc
gacgaggccgacgagatgctcaagatgggcttcgccgacgacgtcgagcggatcctccgc
gacacgccgaccaccaagcaggtggcgctgttctcggccaccatgccgtcgacgatccgc
cgtctcgccaaccagtacctcaccgatccggtcgaggtgaaggtccaggccaagacggtc
acggccaagaacgtgcgtcagcgctggctgctggtcccgcacttccgcaagctcgacgcg
ctcgcccgcttcctcgaggtcgagccgcacgagggcgtcatcgtcttcgtccggaccaag
caggtcaccgaggagctcgccgagcagctgcgagcgtacggtcacagcgcgcaggcgatc
aacggcgacctggtccaggcgcagcgcgagcgggccgtcaacgccctcaagagcggctct
ctcgacatcctcgtggccaccgacgtcgccgcgcgcggcctcgatgtggaccgcgtgagc
cacgtcgtcaactacgacatcccgcacgacccggaggcgtacgtccaccggatcggccgt
acgggacgcgccgggcgcagcggcgacgccatcctcttcgtcacgccccgtgagcgccgt
ctcctcggcgtcatcgagcgcaccaccggccagccggtgaccccgatggacatcccgacc
gccgagcaggtcaacgcccgccgggtcgagcagttcgaggaggcgatcaccgacgcgctc
gcgaccaaggacgtgcacatgttccgcgggctcgtgagcaagtacgccgaggccacgggg
gtcgatccgatcgacgtcgccgcagcgctcgccgtccgcgctcacgagggccggtccttc
ctcctcgacgccaaggacgacatcgtcctcagcgagcgtgaccgagctcgcgaccacggt
gatcgtggagaccgtcccgagcgcccgcagcggccgacgccggacggcatggccgtctac
aggctcgcggtcggcaagcgccagcgcgtcaccccgaagtcgatcatgggtgcgctcgcg
aacgagggcggcctcggccggtccgacttcggcaacatctcgatccgcttcgaccactcg
ctcgtcgaactccccgacccgctgcccagcggtacggagagcgcgctgagccgcacccgc
atcgggggcgacctcatcaacctcgagcgcgaccgcggcgcgcgccgcagcggcagctcc
tccgcgcctcgccgttcgggtggcggccgtagctgggacaatgcgggcaagggccccgta
cgctctgcgaggacgccgcgtcgacgaaagggatag
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