Mycolicibacterium vanbaalenii: Mvan_1258
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Entry
Mvan_1258 CDS
T00449
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mva
Mycolicibacterium vanbaalenii
Pathway
mva03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mva00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mvan_1258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mva03021
]
Mvan_1258
03400 DNA repair and recombination proteins [BR:
mva03400
]
Mvan_1258
Enzymes [BR:
mva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mvan_1258
Transcription machinery [BR:
mva03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mvan_1258
DNA repair and recombination proteins [BR:
mva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mvan_1258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
ABM12093
UniProt:
A1T4J3
LinkDB
All DBs
Position
1347927..1351880
Genome browser
AA seq
1317 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDDEMRHNELSTLEAEMAVERKAIEDQRDADLEARAQKLEAD
MKELEDEGAKSDVKRKVRDGGEREMRQLRDRAQRELDRLEEIWTTFTKLAPKQLIVDELL
YRELQDRYGEYFEGAMGAESIKKLIENFDIDAEAESLRDTIKNGKGQKKLRALKRLKVVA
AFQTNRNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYFLTTEIEGDTGEFT
PAAKDQPESGVYSSPAEAIMALDRGALSVRAKIRVRLTQLRPPAEIEAERFPDGWNMGDA
WTAETTLGRVLFNELLPRGYPFVNKQMHKKVQAAIINDLAERYPMIVVAQTVDKLKDAGF
YWATRSGVTVSMADVLVPPEKQEILERYEAEADSIEKQYQRGKLNKDERNEALVKIWQDA
TEEVGQALRSHYPKDNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCETERGITVTL
AEKQADGTLVRDQHIETSAYARTLATDAVDAKGNVIVERGHDLGDPAIDALLAAGITEVK
VRSVLTCGTGTGVCAMCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVT
GGADIVGGLPRVQELFEARIPRNRAPIADVSGRIRLEESDKFYKITIVPDDGGEEVVYDK
LSRRQRLKVFKHDDGSERLLTDGDHVEVGQQLLEGSADPHEVLRVQGPREVQIHLVKEVQ
EVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERGEFETENRRVVAEGGE
PAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLIP
AGTGINRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgcatcggtctcgcgaccgcggacgacatc
cgcaactggtccttcggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtccggttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgccgtgagcggatgggccacatcgaactggccgcgccc
gtcacgcacatctggtacttcaagggcgtgccctcgcgtctgggctacctgctcgacctg
gccccgaaggatctcgagaagatcatctacttcgcggcctacgtgatcaccgcggtcgac
gacgagatgcgccacaacgagctgtcgacgctggaggccgagatggccgtcgagcgcaag
gcgatcgaggatcagcgcgacgccgacctggaggcccgcgcccagaagctcgaggccgac
atgaaggagctcgaggacgagggcgccaagtccgacgtcaagcgcaaggtgcgcgacggc
ggcgagcgcgagatgcgccagctgcgcgaccgggcccagcgtgagctggaccggctcgag
gagatctggacgacgttcaccaagctggctcccaagcagctgatcgtcgacgagctgctc
taccgcgagctgcaggaccgctacggcgagtacttcgagggcgccatgggtgccgagtcg
atcaagaagctcatcgagaacttcgacatcgacgccgaggccgagtcgctgcgcgacacc
atcaagaacggcaagggccagaagaagctgcgtgcgctcaagcgactcaaggtcgtcgcc
gcgttccagaccaatcggaactcgccgatgggcatggtgctcgacgccgttccggtgatc
ccgccggagctgcgccccatggttcagctcgacggtggccgcttcgcgacgtcggacctc
aacgacctgtaccgccgcgtcatcaaccgcaacaaccggctcaagcgactgatcgacctc
ggtgctcccgagatcatcgtcaacaacgagaagcgcatgcttcaggagtcggtggacgcg
ctgttcgacaacggccgtcgcggccggccggtcaccgggccgggcaaccgtccgctgaag
tcgctgtccgatctgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagctgatggctctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccatgcgcagaacatcaagagcgccaagcgcatggtggaacgtcagcgt
ccccaggtgtgggatgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcacccacgctgcaccgcctcggtatccaggccttcgagccgcagctggtggagggcaag
gccatccagctgcacccgctggtctgtgaggcgttcaacgccgacttcgacggcgaccag
atggccgtgcaccttccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtcgcccgcgtcgggccgcccgctggccatgccgcgtctggac
atggtgaccggcttgtacttcctgaccaccgagatcgagggtgacacgggcgagttcacc
ccggccgccaaggatcagccggagtccggcgtgtacagctcgccggccgaggccatcatg
gcgttggaccgcggcgcgctgagcgtgcgggccaagatccgggtgcggctgacccagctg
cgtccgcccgccgagatcgaggccgagcggttcccggacggctggaacatgggcgacgcc
tggacggcggagaccaccttgggccgcgtgctcttcaatgagctgctgccgcggggctac
ccgttcgtcaacaagcagatgcacaagaaggtgcaggccgcgatcatcaacgatctggcc
gagcgctacccgatgatcgtcgtcgcgcagaccgtcgacaagctcaaggacgccggcttc
tactgggccacccgttcgggtgtcaccgtgtcgatggccgacgtgctggtgccgccggag
aagcaggagatcctcgagcgctacgaggcggaagccgacagcatcgagaagcagtaccag
cgcggcaagctcaacaaggacgagcgcaacgaagcgttggtgaagatctggcaggacgcg
accgaagaggtcggtcaggcgctgcggtcgcactacccgaaggacaacccgatcatcacg
atcgtggattcgggcgcgacgggtaacttcacccagacgcggacgctggccggcatgaag
ggtctggtgaccaacccgaagggtgagttcatcccgcgtccgatcaagtcctcgttccgc
gagggcctgacggtgctggagtacttcatcaacacccacggcgcccgcaagggtctggcg
gacaccgctctgcgtaccgccgactcgggctacctgacccgtcgtctggtcgacgtgtcg
caggacgtcatcgtgcgcgagaccgactgtgagaccgagcgcggcatcaccgtcacgctg
gccgagaagcaggccgacggcaccctggtgcgcgatcagcacatcgagacctccgcctac
gcgcggacgctggccaccgacgcggtcgacgccaagggcaatgtgatcgtcgagcgcggt
cacgacctcggcgacccggccatcgacgcgctgttggccgccggcatcaccgaggtcaag
gtccgctccgtgctgacctgcggcaccggtaccggtgtgtgtgcgatgtgctacggccgt
tcgatggcgaccggcaagctggtcgacatcggcgaggccgtcggcatcgtggccgcgcag
tccatcggtgagcccggcacgcagctgaccatgcgtaccttccaccagggtggcgtcacc
ggcggtgccgacatcgtcggtggtctgccccgcgtgcaggagctgttcgaggcccgtatc
ccacggaaccgtgccccgatcgccgacgtgtccgggcggatccgcctggaggagagcgac
aagttctacaagatcaccatcgttcccgacgacgggggcgaggaggtcgtgtacgacaag
ctctcgcgtcgtcagcgcctgaaggtgttcaagcacgacgacggctccgagcgtttgctg
accgacggcgaccacgtcgaggtcggccagcagctgctggaaggctcggccgacccgcac
gaggtgctgcgcgtccagggtccccgcgaggtgcagatccacctcgtcaaggaggtccag
gaggtgtaccgcgcccagggtgtgtcgatccacgacaagcacatcgaggtcatcgtccgg
cagatgctgcgtcgcgtcacgatcatcgattcgggtgcgacggagttcctgcccggctcg
ctgaccgagcgtggcgagttcgagaccgagaaccgtcgggtcgtcgccgagggcggcgag
cccgcggcgggtcgcccggtgctgatgggtatcaccaaggcgtcgctggccaccgattcg
tggctgtcggcggcgtcgttccaggagaccacccgcgtgctgaccgatgcggcgatcaac
tgccgcagcgacaagctgcagggtctgaaggagaacgtgatcatcggcaagctgatcccg
gccggtaccggcatcaaccggtaccgcaacatccaggttcagccgaccgaagaggcccgc
gccgcggcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggccag
gccaccggtgctgcggtgccgctggacgattacggctactcggactaccggtaa
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