Mycolicibacterium vanbaalenii: Mvan_3440
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Entry
Mvan_3440 CDS
T00449
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
mva
Mycolicibacterium vanbaalenii
Brite
KEGG Orthology (KO) [BR:
mva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mva03019
]
Mvan_3440
Enzymes [BR:
mva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Mvan_3440
Messenger RNA biogenesis [BR:
mva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Mvan_3440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_30
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABM14235
UniProt:
A1TAN5
LinkDB
All DBs
Position
complement(3656267..3659056)
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AA seq
929 aa
AA seq
DB search
MTTQPDPGTATESVAAFTALLPFELDDFQRRACEALAQGHGVLVCAPTGAGKTVVGEFAV
HLALAAGRKCFYTTPIKALSNQKHNDLVLRYGPKRIGLLTGDQAINGDADVVVMTTEVLR
NMLYADSRALQGLSYVVMDEVHFLADRMRGAVWEEVILHLPEEVRLVSLSATVSNAEEFG
GWIKTVRGDTTVVVDEHRPVPLWQHVMVGKRLLDLFDYRASGPAGRNLLVDPELLRHIAH
RREAERLTDWQPRGRGRSGRPSGLYRTPGRAEVINVLAQDNLLPAITFIFSRAGCDAAVK
QCLRSSLRLTTDEERARIADIVDRRTADLNDSDLIVLDFHEWREGLLRGLAAHHAGMLPV
FRHTVEELFTAGLVKAVFATETLALGINMPARTVVLEKLVKFNGEQHMPLTPGEYTQLTG
RAGRRGIDVEGHAVVLWNPDVDPAEVAGLASTRTFPLRSSFAPTYNMTINLVHQMGPAQA
HQLLERSFAQYQADRSVVGLVRGVERGERMLGELAAEMGGPDSAILDYVRLRAQISQRER
AQSRASRLQRRQATNEALAALRPGDIITITAGRRGGLAVVLEPARDDEDPRPLVLSEHRW
AGRISSADYTGAPGPLGKMSLPKRIEHRNPRVRRDLASALRSAAARLDVPSVRASRRSGP
PPEHDVDPELNVLRDRMRAHRAHGLPDREKLARVAERYLRIEEDNEQLRKKIAAATNSLA
QTFDRIVVLLTDRGFITVDGVDETTTVEQDTPAVTDDGRLLARIYSESDLLVAECLRAGV
WEGLDSAELAAALSAVLYESRREGHGPGDGSDIPTGRLRRALNQTRRLWSELRADEQRHR
LPPSREPDDGFVAAVHRWASTGDLASALTASDHAGTGASMSAGDFVRWCRQVLDLADQVR
NAAPSAALRATAKRAINDVRRGVVAVDAG
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcaacctgatccgggtacggcgaccgaaagcgtggcggcgttcaccgcgctg
ctgcccttcgaactcgacgacttccagcgccgcgcctgcgaggcgttggcccagggccac
ggagtgctggtctgcgccccgaccggcgcgggcaagaccgtcgtcggtgagttcgcggta
cacctggcgttggcggcggggcggaagtgtttctacaccaccccgatcaaggcgctgagc
aatcagaagcacaacgatctggtgctccggtacgggccgaagcgcatcggtctgctcacc
ggtgaccaggccatcaacggtgacgccgacgtcgtcgtgatgaccacggaggtcctgcgc
aacatgctgtacgcggattcgcgtgcgctgcagggtctttcctacgtcgtgatggacgag
gtgcatttcctcgccgaccggatgcgcggggcggtgtgggaggaggtcatcctgcacctg
cccgaagaggtacggctggtgagcctgtcggccacggtgagcaatgccgaggagttcggc
ggctggatcaagaccgtccggggcgacaccacggtggtggtcgacgagcaccgcccggtg
ccgctgtggcagcacgtgatggtcggcaagcggctgttggacctgttcgactaccgcgcc
tccggccccgcaggccgcaacctgctggtggacccggagttgttgcgccacatcgcacat
cggcgtgaagccgaacgcctgaccgactggcagcctcgtggccgtgggcgatccggccgg
ccgtcgggactgtaccggacacccggcagggccgaggtgatcaacgtgctcgcgcaggac
aacctgctgcccgccatcacgttcatcttctcccgcgccggctgcgacgccgcggtcaaa
cagtgtctgcgctcgtcgctgcggctgaccaccgatgaggagcgcgcgcgcatcgccgac
atcgtggaccgccgcaccgccgatctcaacgactccgacctgatcgtgctggacttccac
gagtggcgggaggggctgctgcggggtctggcggcacatcacgcaggcatgctgccggtc
ttccgccacaccgtggaggagctgttcaccgccggcctggtgaaggccgtattcgccacg
gagacactggctctgggcatcaacatgcccgcgcgcacggtcgtgttggagaaactggtc
aagttcaacggcgagcagcacatgccgttgacgccgggggagtacacccagctgacgggc
cgggccggccgccgcggcatcgacgtcgagggccacgccgtggtgctgtggaatcctgat
gtggatcccgccgaagtcgcggggctcgcctcgacccggacgttcccgctgcgcagttcg
ttcgcgcccacctacaacatgacgatcaacctggtgcaccagatgggtccggcacaggcc
catcagctgctcgaacggtctttcgcgcagtaccaggccgaccgatcggtggtgggactg
gtgcgcggcgtcgaacgcggcgagcgcatgctcggcgagctcgccgccgagatgggcggt
ccggattcggcgatcctcgactatgtcaggctgcgcgcgcagatctcgcaacgcgaacgc
gcgcagtcgcgcgcctccagattgcagcgccgccaggccaccaacgaggcgctggccgcg
ctgcgtcccggcgacatcatcacgatcaccgcgggccggcgaggcggactggccgtggtc
ctcgaaccggcacgcgacgacgaggaccctcgaccactggttctctccgaacaccgctgg
gcaggccggatctcgtcggccgactacaccggggcgcccggcccgctcgggaagatgtcg
ctaccgaaacgcatcgagcaccgcaacccgcgggtccgccgcgatctggcgtcggcgctg
cggtcggcagccgctcgtctcgacgttccctcggtgcgggcgtcgcgcaggagcgggccg
ccaccggaacacgacgtggacccggaactgaacgtgctgcgggaccggatgcgcgcgcac
cgggcccacggcctgcccgaccgggagaagctggcccgcgtcgccgaacgctacctgcgc
atcgaggaggacaacgagcagctgcgcaagaagatcgccgcggcgacgaactcgctggct
cagacgttcgaccggatcgtcgtgctgctgaccgaccgcgggttcatcaccgtcgacgga
gtcgacgaaacgaccaccgtcgagcaggacacgcccgcggtcaccgacgacggccggctg
ctggcgcgcatctacagcgagagcgacctgctggtcgccgagtgcctgcgggccggggtg
tgggaggggctcgattccgcagagttggccgcggcgctgtcggcggtgctctacgaatcg
cgacgcgagggtcacggccccggtgacgggtccgacatccccaccggcaggctgcgtcgc
gcgctcaaccagacccgcaggttgtggagcgagctgcgcgccgacgagcagcggcaccgc
ctcccgcccagccgcgaacccgacgacggattcgtcgccgccgtgcaccgttgggcgagc
accggcgacctggcgtcggcgctgacggcgtccgaccacgccggcaccggcgcgtcgatg
tcggccggcgatttcgtccgctggtgcaggcaggtgctcgacctcgccgaccaggtgcgc
aatgcggccccgtcagctgcgttgcgggcaaccgcgaaacgcgcaatcaacgacgttcgg
cgcggcgtcgtagctgttgatgccgggtag
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