Mycolicibacterium vanbaalenii: Mvan_5233
Help
Entry
Mvan_5233 CDS
T00449
Name
(GenBank) ATP-dependent DNA helicase, RecQ-like protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mva
Mycolicibacterium vanbaalenii
Pathway
mva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mvan_5233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mva03019
]
Mvan_5233
03400 DNA repair and recombination proteins [BR:
mva03400
]
Mvan_5233
Enzymes [BR:
mva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mvan_5233
Messenger RNA biogenesis [BR:
mva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mvan_5233
DNA repair and recombination proteins [BR:
mva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mvan_5233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
KORA
Motif
Other DBs
NCBI-ProteinID:
ABM16004
UniProt:
A1TFQ4
LinkDB
All DBs
Position
complement(5602781..5604895)
Genome browser
AA seq
704 aa
AA seq
DB search
MTTRADAQAILEQLAGPGAVLRDDQWTAIEALVVHRRRALVVQRTGWGKSAVYFISAKLL
RAAGHGPTVIVSPLLALMRNQVAAADRAGVHAATINSSNVTDWAEIHDRVRSGDLDVLLV
SPERLNNPDFRDQVLPSLAHDAGLVVVDEAHCVSDWGHDFRPDYRRIRTLLADLGADVPV
LATTATANDRVVADVAAQLGVGDFGREDQDGGSDTLVLRGGLDRESLRLSVVNAGNPAQR
AAWLVAQLDSLPGSGIVYTLTVAQAHDVASLLAEQGHKVAAYTGATEASEREQLESDLLD
NRVKALIATSALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRSTASAEVILLPGRED
QEVWRYFASVAFPSESMVRNVIGALETDRPQSTAALEPLVDLNRSRLEMVLKVLDVDGAV
RRVKGGWVATGRPWAYDEQRYRTLDEARRREQQAMLDYQSTDGCRMAFLRRQLDDPELGA
DERCGRCDNCAGSSYSADVDAAVAEDSRQRLMRPGVEISPRKQWPSGLAKLGVDLSGRIT
DGPAPGRVIGRLTDLGWGARLRTLLEQDDAEVPDDVVQAAVKVLAAWDWQVRPTAVMALD
SDTHPLLTSSLARRLAELGRLTDLGVLRYTPERRPVTAANSAYRVAALRGAWESPDPDAI
SAAGGPVLLVDAMTDTGWTLTMAARVVRSAGAPAVLPFALAATS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgagagctgacgcgcaggcgatcctcgagcaactggcgggccccggggccgtc
ttgcgcgatgaccagtggacggcgatcgaagctctggtcgtgcaccggcgccgcgccctc
gtcgtgcaacgcaccgggtggggcaagtcggcggtgtacttcatctccgccaagctgctg
cgcgcggccggccacggaccgacggtcatcgtgtcgccgctgctggcgttgatgcgcaac
caggtcgctgccgccgaccgggccggtgtgcacgccgccaccatcaactccagcaacgtg
accgactgggccgagatccatgaccgggtccgctccggcgacctcgacgtgctgctggtg
agcccggagcggctgaacaatcctgactttcgcgatcaggtgctgccgtcgctcgcccac
gacgcgggtctggtggtggtggacgaggcgcactgtgtgtcggactgggggcacgatttc
cggcccgactaccggcgcatccgcacgctgctggcagacctgggcgccgacgtcccggtg
ctggccaccaccgccaccgccaacgaccgggtggtcgccgacgtcgccgcgcagttgggc
gtgggcgacttcggacgcgaggatcaggacggcggaagcgacacgctggtgctgcggggc
ggcctggaccgcgagtcgctgcggctgtcggtggtcaacgccgggaacccggcgcaacgt
gcggcgtggcttgtcgcccaactggattcgctgccgggcagcggcatcgtctacaccctg
acagtggcgcaggcgcacgacgtggcgtccctgctcgccgagcagggacacaaggtcgcc
gcctacaccggggccaccgaggcttccgaacgtgaacaactcgagtccgacctgctggac
aaccgggtcaaggcgctcatcgccacgtccgcgctcggcatgggcttcgacaagcccgat
ctgggtttcgtggtacacctgggcgcaccttcatcgccgatcgcctactaccagcaggtc
ggtcgtgcgggacgctccacggccagcgcggaggtgatcctgctgcccgggcgggaggat
caggaggtgtggcggtacttcgcgtccgtcgcatttccgtcggaatccatggtgcgcaac
gtgattggagcactcgaaaccgaccgcccgcagtctacggccgcgctggagccgctcgtc
gacctcaaccggtcacggctggagatggtgctcaaggtgctcgacgtcgacggcgcggtg
cggcgcgtcaagggcggctgggtcgccaccggccggccctgggcatacgacgaacagcgc
taccgcacgctcgacgaggcccgcaggcgcgaacagcaggccatgctcgactaccagtcc
accgacggctgccggatggccttcctgcgccgtcagctcgacgatcccgaactcggcgcc
gacgagcggtgcggccgctgcgacaactgcgcgggatcgagttattccgccgacgtcgac
gcggcggtcgccgaggactcccgacagcggctcatgcggccgggggtggagatctcgccg
cgtaaacagtggccgtcggggctcgccaagctgggtgtcgatctcagcggccgcatcacc
gacggaccggcacccggacgtgtcatcggccggctcaccgacctgggctggggcgcccgg
ctgcgcacactgctcgagcaggacgacgcggaggtgcccgacgacgtggtccaggccgcg
gtcaaggtgctggcggcgtgggactggcaggtacggccgaccgcggtcatggcgctggac
tcggacacccacccgctgctgacctcttcgctggcccgcaggctggccgaactggggcgc
ctcaccgacctcggtgttctgcgctacacgccggagcggcggccggtaaccgcggcgaac
tccgcctaccgcgtcgccgcgttgcgcggcgcctgggagtcgcccgatcccgatgcgatc
agcgcggccgggggcccggtgctgctggttgacgccatgaccgacaccggatggacgctg
acgatggccgcgcgggtggtgcgctccgcgggtgcgcccgcggtgctgccgttcgcgttg
gcggccacctcgtag
DBGET
integrated database retrieval system
