Mycolicibacterium vanbaalenii: Mvan_5766
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Entry
Mvan_5766 CDS
T00449
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mva
Mycolicibacterium vanbaalenii
Brite
KEGG Orthology (KO) [BR:
mva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mva03019
]
Mvan_5766
Enzymes [BR:
mva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Mvan_5766
Messenger RNA biogenesis [BR:
mva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Mvan_5766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
WHD_HA2
AAA_19
NACHT
nSTAND_NTPase5
T2SSE
nSTAND3
AAA_30
SLFN-g3_helicase
ABC_tran
PhoH
Motif
Other DBs
NCBI-ProteinID:
ABM16531
UniProt:
A1TH81
LinkDB
All DBs
Position
complement(6155162..6159094)
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AA seq
1310 aa
AA seq
DB search
MPEPSRTDVRALRARLDDLTISDAARLGRRLRQLRDPSEEQLGKLAKQFDTAEALVASRL
AAVPQISYPDLPVTERRDEIAAAIAANQVVIVAGETGSGKTTQLPKICLELGRGIRGTIG
HTQPRRLAARTVAARIAEELGTPLGEAVGYTVRFTDQASDRTLVKLMTDGILLAEVQRDR
RLLRYDTLIIDEAHERSLNIDFLLGYLRQLLPRRPDLKVIVTSATIEPERFAAHFAGAPI
VEVSGRTYPVEIRYRPLEVTVPGQDGEDPDDPDHEVVRTELRDPTEAIIDAVAELEAEPP
GDVLVFLSGEREIRDTAEALRAVVDPGHTEVLPLYARLPTAEQQKVFHPGRTARRIVLAT
NVAETSLTVPGIRYVVDPGTARISRYSRRTKVQRLPIEPISQASAAQRAGRSGRTAPGVC
IRLYSEQDFEARPRYTDPEILRTNLAAVILQMAALGFGDIEGFGFLDPPDARSIRDGVAL
LQELGAFDQQADLTDIGRRLAQIPVDPRLGRMILQADAEGCVREMLVLAAALSIPDPRER
PADKEEAARQKHARFADQHSDFTSYLNLWHYLTEQRKERSGSSFRRMCRDEFLHYLRIRE
WQDLVGQLRGICRDIGIREQDEPADPAAVHAALAAGLLSHVGMRDTDGRSYQGARNAKFV
LAPGSVLSKRPPRWVVVADLVETSRLFGRTAARIEPETVERVAGHLVQRTYSEPHWDAER
GAVMAYERVTLYGLPLVARRRVGYAQVDPEAARDLFIRHALVEGDWQTKHHFFRDNARLR
EELAELEDRARRRDLLVGDDEVFAFYDARVPADVVSARHFDGWWRKQRHRTPGLLTMTRD
DLLRNEAGAEQPDAWQAGDLSLPLSYRYDPGSADDGVTVHVPVDVLARLGGDEFAWQVPA
LREELLTALIKSLPKDLRRNFVPAPDTARALLASITPDSGPLLDAIQRELRRRTGILVPI
DAFDLDKLPPHLRVTFAVEAADGTVVSRGKDLGELQQQLAAPSRQAVAATVAGDLERTGL
RDWPPELDELPRVVERKGATGHLVRGYPALVDAGKAADIKVFATKAEQDAAMGPGCRRLL
LTAGPSVTKGVERSLDTRTRLVLGTNPDGSLAALIDDCAAAAVQVLVPAPAWTREEFAAA
RKRLAANIVATTADVVRRVEKVLVALHEVEVALPSKPTPAQADAIADIRGQLARLVPPGF
VAATGAARLGDLARYLTAIGRRLERLPHAPAADRERMERVAAVQAEYDDLRRALSPGRAA
ATDVQDIARMIEELRVSLWAQQLGTARPVSEQRIYRAIDAVGVAGPGGGR
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaaccgtcccgcaccgatgtgcgcgccctgcgtgcgcggctggacgatctgacg
atcagcgacgccgcccgcctcggccgtcgcctgcgccagctgcgcgacccgtcggaagaa
cagctgggcaagcttgcgaagcagttcgacacggcggaagcgctggtggcttcccgcctc
gccgcggtgccgcagatcagctatcccgacctgccggtcaccgagcggcgcgacgagatc
gccgcggccatcgccgccaaccaggtcgtgatcgtggcgggcgagaccggctcgggcaag
accacgcagctgcccaagatctgcctcgagctcgggcggggtatccgcggcaccatcggc
cacactcagccgcgccggctggccgcccgcaccgtcgcggcgcgtatcgccgaggaactg
ggcaccccgctgggggaggcggtcggttacacggtgcggttcaccgatcaggcctccgac
cggacgctggtcaagctgatgaccgacggcatcctgctcgccgaggtgcagcgggaccgc
cggctgctgcgctacgacacgttgatcatcgacgaggcccatgagcgcagcctcaacatc
gacttcctgctcggctacctgcggcagctgctgccgcggcgacccgacctgaaggtgatc
gtgacgtcggccacgatcgagccggagcggttcgcggcgcacttcgccggagcgccgatc
gtcgaggtgagcggacgcacgtatccggtcgagatcaggtaccggcctttggaagtcacg
gttcccggtcaggacggcgaggatcccgacgaccccgaccacgaggtcgtgcgcaccgag
ctgcgcgatcccaccgaggccatcatcgacgcggtggccgaactggaggcggagccaccc
ggagacgtgctggtgttcctgtccggtgagcgtgagatccgggacaccgcggaggctttg
cgggcggtggtggaccccggccacaccgaggtgttgccgctctatgcccggctgccgacc
gcggaacagcagaaggtgttccacccgggccggacggcacgccgaattgtgttggccacc
aacgtggccgagacgtcgctgacggtcccgggcatccggtacgtcgtcgaccccgggacg
gcgcgcatttcgcggtacagccgcaggaccaaggttcagcggctgccgatcgaaccgatc
tcgcaggcctcggccgcccagcgggccggccggtcgggccgcaccgcgcccggcgtctgc
atccggctgtattcggagcaggacttcgaggcccggccccgatacaccgacccggagatc
ctgcgcaccaacctggccgcggtgatcctgcagatggccgcgttggggttcggcgacatc
gaaggtttcgggttcctcgacccgcccgatgcgcgcagcatccgcgacggcgtcgcgctg
ctgcaggagctcggcgcgttcgaccagcaggccgatctcaccgacatcggacgcaggctg
gcgcagattcccgtcgacccacgcctgggccggatgatcctgcaggccgacgccgagggc
tgtgtgcgcgagatgctggtgctggctgcggcactgtcgattccggacccgcgggagcgg
cccgccgacaaggaggaggcggcccggcagaagcacgcccgcttcgccgaccagcattcg
gacttcacgtcgtacctgaatctgtggcactacctgaccgagcagcgaaaagaacgctcc
ggcagctcctttcggcggatgtgccgcgacgagttcctgcactacctgcggatccgggag
tggcaggacctggtgggtcaactgcgtggcatctgccgcgatatcgggatccgggaacag
gacgagccggctgatccggccgcggtgcacgccgcactggcggcaggactgttgtcgcac
gtcgggatgcgggacaccgacggccgcagctaccagggtgcccgcaacgccaaattcgtc
ctcgccccgggctcggtgctgagcaagcgtccgccgcgctgggtggtggtcgccgacctg
gtggagaccagcaggctgttcggcaggaccgcggcgcggatcgagcccgagaccgtggag
cgggtcgcggggcacctcgtgcagcggacctacagcgagccgcactgggatgccgagcgc
ggcgcggtgatggcctacgagcgggtcaccctgtacggccttccgctggtggcgcgccgc
cgggtcggatacgcgcaggtggacccggaagccgcgcgggacctgttcatccggcatgcg
ctggtcgagggggactggcagaccaaacaccacttcttccgcgacaacgcaaggctgcgt
gaggaactcgccgaactggaggaccgggcccgccgtcgggacctgctggtcggcgacgac
gaggtcttcgccttctacgacgccagggtgcccgcggacgtggtgtcggcccgccacttc
gacggatggtggcgcaagcagaggcaccgcacacccgggctgctcacgatgacccgcgac
gatctgctgcgcaacgaggccggagcggagcagcccgacgcctggcaggccggggacctg
tcgttgccgctgagctaccgatacgaccccggctcggccgatgacggtgtgaccgtgcac
gttccggtggatgtgctggcccgcctcggtggcgacgaattcgcctggcaggtgcccgcg
ctgcgcgaggagctgctcaccgcgttgatcaagtcgctgcccaaggacctgcgccgcaac
ttcgtgcccgcgccggacaccgcacgggcgctgctggcgtccatcactcccgacagcggg
ccgttactcgacgcgatacagcgtgaattacggcgtcgcacaggaattctggtgcccatc
gatgcgttcgacttggacaagctgccgccgcacctgcgggtcacgttcgcggtggaggcc
gccgacggcaccgtcgtgtcccgcggcaaggatctcggcgagctgcagcagcagctcgcc
gcgccgtcccgccaggccgtcgcggccaccgtcgcaggtgatctggagcgcaccggtctg
cgcgactggccgccggagctcgacgagctgccccgtgtagtggaacggaaaggcgccacc
gggcacctggtccgcggctatcccgcgttggtggacgcggggaaggcggccgacatcaag
gtctttgcgacgaaggccgaacaggatgcggcgatgggccccggctgtaggcggctgttg
ctgaccgcggggccgtcggtgaccaaaggcgttgagcggtccctggatacccgcacacgc
ctggtgttgggcaccaacccggatggatccctggcggcgctgatcgacgactgcgctgcg
gcggcggtgcaggtgctggtccccgcgccggcgtggacgagagaagaattcgccgcggct
cggaaaaggctggcggccaacatcgttgcgaccaccgccgacgtggtgcgtcgggtcgag
aaggtgctcgtcgcgctgcacgaggtcgaggtcgcgctgccgtcgaagcccacccctgcc
caggccgacgcgatcgccgacatccgcgggcagctggctcgtctggttccgccgggattc
gtcgccgcgaccggcgcggcccggctgggggatctggcccgctacttgaccgccatcggg
cgtcggctggagcggctgccgcacgcacccgccgccgaccgggagcggatggagcgcgtc
gcggcggtccaggccgagtacgacgatctgcgccgcgcgctgtcgccgggtcgcgcggcg
gcgaccgatgtgcaggacatcgcccgcatgatcgaggagctgcgggtgagcctgtgggcg
cagcagctcggtaccgccaggccggtcagcgagcaacgcatctaccgggccatcgacgcc
gtcggcgtcgccgggccgggcgggggtcggtga
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