Microcoleus vaginatus: D0A34_07405
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Entry
D0A34_07405 CDS
T08026
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mvag
Microcoleus vaginatus
Pathway
mvag03420
Nucleotide excision repair
mvag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mvag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D0A34_07405 (pcrA)
03430 Mismatch repair
D0A34_07405 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvag03400
]
D0A34_07405 (pcrA)
Enzymes [BR:
mvag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D0A34_07405 (pcrA)
DNA repair and recombination proteins [BR:
mvag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D0A34_07405 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
D0A34_07405 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
ResIII
AAA_30
DEAD
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UNU18725
LinkDB
All DBs
Position
1776473..1778839
Genome browser
AA seq
788 aa
AA seq
DB search
MTQTTDFLSHLNPSQRQAVAHYNGPLLVVAGAGSGKTRALTYRVANLVRTHRVDPENILA
VTFTNKAAREMKERIEKLLATQQAEAEYGKPLVELAPNVQTKLRSQIYQRITKQIWMGTF
HSLCGRILRYDIEKYQDEKGRQWKKNFSIFDESDAQSIVKQIVTKTLNLDDKKFDPRKVR
YVISNAKNKGLSPQEYQAAEPDYRGRVIADVYSRYQDALAANNALDFDDLILVPVKLLSQ
NEEVLSYWHKKFCHILVDEYQDTNRTQYDLIRMLVTNNADPKNFDKWQNRSIFVVGDVDQ
SIYSFRMADYTILLEFQEDFGDGLSDAKTQTMVKLEENYRSRENILQVANHLIEHNTERI
EKILRPTREPGAPIVVWRADNELDEAEFVAGQIHSLKRQNSEYENGSNFAILYRTNAQSR
SFEEALMRLDIPYNIVGGLKFYDRKEIKDILAYLRAVANPDDSVSLKRIINTPRRGIGDT
TFSKVEDAATQLGIPLWEILSDESSVNTLAGRSAKAIIKFAEMIGRWQSQLETLPASQIV
QGIIQDSGYIEDLKNQGTDEATNRIENVIELYNAVLQFEEQNEEPTLTSFLAKASLASDL
DDLQEEDSRVSLMTLHSAKGLEFPVVFLVGMEQGLFPNFRSLDDPKAIEEERRLCYVGIT
RAQELLFLTHTRERRLWGGFREHCTPSLFLGELPTHLLAGSAKKTQGGKTATSKGKTNNS
AANSGSSQAGNNGQSADWQTGDRVFHHAFGVGEITHVLGAGDKTNLAIKFSGLGRKIIDP
RTAKLQRV
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaaccactgatttcctcagccacctcaacccatctcagcgccaagccgtcgcc
cattataacgggccgctattagtagtagccggcgctggttccggcaaaacaagagctcta
acttaccgagttgctaacttagttcgcacgcatcgagttgatccagaaaatattctggcg
gtgacatttacaaataaagccgccagggagatgaaagaaagaattgagaaattgctggcc
actcagcaagctgaagcggaatatggcaaacctttggtagagttggccccgaatgtgcaa
accaaattgcgatcgcaaatttaccagagaattaccaaacagatttggatggggactttt
cactctttgtgcggccggattctccgctacgacattgagaaataccaagacgaaaaaggt
cgccagtggaagaaaaacttttcgatttttgacgagtcagatgctcaaagcatcgtcaaa
caaatcgtcaccaaaaccctgaacctcgacgacaagaaatttgaccccagaaaagtccgc
tatgtcatcagcaacgctaaaaataaaggcttgtcgcctcaagaataccaagcagcagaa
ccggattatcgcggtcgtgtaattgccgatgtttacagtcgctaccaagacgctttagca
gccaacaatgccctagattttgacgatttaatcttggttcccgttaaacttttgagccaa
aacgaggaagtattaagttactggcataaaaagttttgccatattttagttgacgaatac
caagatactaaccgcactcaatacgatttgattcggatgttggtgacaaataacgccgac
ccgaaaaacttcgataaatggcaaaaccgctcgatttttgtcgtgggcgatgtcgatcaa
tcaatttacagctttcggatggcagattataccatattgctggaatttcaagaggatttt
ggagatggtttgtccgatgcaaaaactcagacaatggtaaaattagaggaaaattatcga
tcgcgcgaaaacatcctgcaagtggcgaaccacttaatcgaacacaataccgaacgcatc
gaaaaaattctgcgcccgactcgcgaaccgggagctccgattgttgtctggcgggcggac
aacgaattagatgaagcggaatttgtagctggtcaaattcattccttaaagcgccaaaat
tccgaatacgaaaacggcagtaactttgcgattctctaccgcacaaatgctcaatctcgc
tcctttgaagaagcgttaatgcgtttagatattccttacaatattgtcggtggcctgaag
ttttacgatcgcaaagaaatcaaagatatcctagcatacctgcgggcggttgccaatccc
gacgatagcgtcagcctcaaacgcatcatcaatactccccgtcgcggcattggcgatacc
acattttccaaagtggaagacgctgcaactcaattgggcattcccctgtgggaaatcctc
agcgatgaatcttctgtcaatactctagcagggcgatcggcaaaagctattattaagttt
gccgaaatgattggtcgttggcaatcgcaacttgaaaccctgccggcttcgcaaattgtc
caaggaattatccaagattcaggctacattgaagatttgaaaaatcaaggaaccgacgaa
gccacaaatcgcatagaaaacgtcatagaattgtacaatgcagtgctacaatttgaagaa
caaaacgaagaaccgacgctgacatcatttttagcaaaagcatctttagcatccgattta
gatgacttgcaggaagaagattcccgcgtgtcgctgatgacgctgcactcagcaaaaggg
ctagaatttcccgtagtatttctagtcggaatggaacagggtttatttcccaatttccgc
agcttggacgacccaaaagcgatcgaagaagaacgccgtttgtgctacgtcggcatcact
cgcgcccaggaattgctatttctcacccacactcgcgaacgccgcctctggggaggtttc
cgggaacactgcaccccttcgctattcttaggggaattaccgacacatttgctggctgga
agtgcgaagaaaactcaaggggggaaaacggctacatctaagggaaaaactaataattca
gccgctaattccggcagttctcaagcgggaaacaatggacaatcggcggattggcaaacg
ggcgatcgggtttttcatcatgcttttggagttggagaaattacgcacgttttaggggcg
ggcgataaaactaatctggcaattaagttttcgggtttgggcagaaaaatcatcgatccg
agaacagctaagttgcagcgagtgtaa
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integrated database retrieval system
