Microcoleus vaginatus: D0A34_14090
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Entry
D0A34_14090 CDS
T08026
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mvag
Microcoleus vaginatus
Pathway
mvag03410
Base excision repair
mvag03430
Mismatch repair
mvag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D0A34_14090
03430 Mismatch repair
D0A34_14090
03440 Homologous recombination
D0A34_14090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvag03400
]
D0A34_14090
DNA repair and recombination proteins [BR:
mvag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
D0A34_14090
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D0A34_14090
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D0A34_14090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
HTH_11
Motif
Other DBs
NCBI-ProteinID:
UNU19854
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All DBs
Position
3466471..3469026
Genome browser
AA seq
851 aa
AA seq
DB search
MTETPQNWQNQPLPQPPAWLIQAVRNHAPELPGNYAATLLWYRGIQNPEQIPGFLNPQLY
QPASPFEFGLEMNWAIERIQQARNSAEKVAIWGDFDADGITSTSVLWDGLGEFFAQDDQL
TYYIPNRFTESHGLNIPGIDALAKSGISLIITCDTGSTNIAEIEYATSLNIDTIITDHHT
LPDDRPPATAIINPRYFPPNHQLFNLSGVGVAYKLVEALYHTLPDIPQRPLTDLLELVAI
GLIADLVQLTGDSRYLAQIGIQQLQKQIANPTRPGVAKLLELCKRSGDRPTDISFGLGPR
INAVSRIQGSASFCVELLTSRDKKRCEELANLTEIANTRRKSLQKDVAKDAANKLAKLDL
STTSVIVLSDPQWPVGVLGLVAGQIAQEYGRPVILFSTEGSEKINENSPEMQFTSFLDSE
SPTLSPSKIARGSARSANQIDLYQLVKDQAHLLHRFGGHPFAAGLSLPVENIPLFTDAVN
QQLRQQYSTDSLTATPIQADLKITVSELGKDLFQELKLLEPCGMGNPAPKLLIENCWFEN
LWNQKIKDLKGQKVEYIKTEFTIRDESSDTGFPGIWWGHNQNEVPQGRCDVTVELDFNTY
KSRYEVRLVSVQERTEDNQINSQTPIDWIVDWRNRNNDEELLGASTNLESQMPIDNLVYN
SQKADRENSIVLKECPASWDELRIWFRQAQHTQKKLAIAYTLPPLVPPQQICQQLIGIAK
YLSRTNKPVTRQQLRQKLGISDTSLQLGFKTLTYLGFQIHYRDRAFHIARQAETAQQQDA
LDHIPKPLLDSQSIQFSVPNSPIAARFAAQFLAAVSEEQFRRKYFCEVPLSTIVSIARET
VFQEDSTANPF
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacccctcaaaactggcaaaatcaacccttaccccaacccccagcttggctg
atccaagctgtcagaaaccacgcaccagaactccccggaaactatgccgcaacacttctc
tggtatagaggaattcaaaaccccgaacaaatacccggtttcttaaacccccaactttac
caaccagcaagtccctttgaattcggactagaaatgaactgggcaatagaaagaatccag
caagcacgaaacagcgcagaaaaagtagcaatttggggagacttcgacgccgacggcatt
acctcaacctccgtactttgggacggactgggagaattttttgctcaagacgaccaacta
acttattacattcccaaccgcttcaccgaatctcacggactcaacatcccgggaatagat
gccttagcaaaatcgggaatcagcttaattattacctgcgataccggcagtacaaacatc
gccgaaatcgaatatgcgactagcttaaacatcgatacaattatcaccgaccatcataca
ttacccgacgatcgcccgccagctacagccattatcaatccccgctacttccccccaaac
caccaactatttaacctctcaggagttggagtagcctacaaattagttgaagcattatat
cacacattaccggatattccgcagcgcccgctcacagatttattagaattagtagcgatc
ggcttaattgccgatttagtccaacttacaggagacagccgctacctagcacaaatcggc
atccaacaactgcaaaaacaaatcgcaaatcccacccgcccgggagttgcaaaattgctc
gaactgtgcaaaagatcgggcgatcgcccaaccgacatttccttcggcctcggcccccga
atcaacgccgtcagccgcattcaaggatcagccagcttctgcgtagaactcctcaccagc
cgcgacaaaaaacgttgcgaagaactagccaatttaaccgaaattgccaacaccagacgt
aaatctttacaaaaagatgttgccaaagatgccgccaacaaactagccaaactcgacctt
tcaactactagcgtcatcgtcctcagcgacccgcaatggcccgtaggtgtattaggatta
gtagcgggacaaatagcccaagaatacggccgcccggtgattttattcagcacagaagga
agcgaaaaaattaatgaaaattccccggaaatgcaatttacctccttcttagattccgaa
tcaccaacactttccccatccaaaattgccaggggctcggcgcgttccgccaatcaaatc
gacctttaccaattagtcaaagatcaagcgcatttattgcacagatttggcggtcatcct
ttcgccgccggattgagtctcccagttgaaaatatccccctatttaccgatgcagttaat
cagcaactgcgacaacaatacagcaccgatagtttaacagccacccccattcaagccgac
ttaaaaattactgtctccgaattaggcaaagacttatttcaagaactaaaattgctcgaa
ccttgcggtatgggcaaccccgcacccaaattgctgattgaaaactgctggtttgagaat
ctttggaatcaaaaaattaaggatttgaaagggcaaaaagtagaatatatcaaaacagaa
tttaccattagggacgaatctagcgatacgggatttcccggtatttggtggggacacaat
caaaatgaagttccccaaggccgctgcgatgtcaccgttgaactcgattttaatacttac
aaatcgcggtatgaagtgcgcctcgtatcagtgcaagaacgcacggaagacaaccaaata
aattctcagactccaatagattggattgtagactggcgcaatagaaataacgatgaagag
ttattaggcgctagcacaaacttagaatctcaaatgccgatcgacaatctagtttacaat
tcccaaaaagccgatcgcgaaaactcgatcgtcctcaaagaatgccccgcaagctgggac
gaactgcggatctggtttcggcaagcacagcacactcagaaaaaacttgcgatcgcctat
acattacccccactcgtacccccacagcaaatctgccaacagctaatcggcatcgccaaa
tacctcagccgcaccaacaaacccgtcaccagacagcaactccgccaaaaactcggcatc
agcgacacatcgctgcaactagggttcaaaaccctaacatatctcggtttccaaatccat
taccgcgatcgagctttccacatcgccagacaagccgaaaccgcacagcagcaagacgcg
ctcgatcacatccccaaacccttattagatagccaatccattcaattctcagtgccaaat
tccccgattgccgcgcgttttgcagcgcaattcctagcagcagtctccgaagaacaattc
cggcggaaatatttctgtgaagtacccctctccaccattgtgtcgatcgcccgagagacc
gttttccaagaagattctacagcaaatcccttctaa
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