Microcoleus vaginatus: D0A34_14625
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Entry
D0A34_14625 CDS
T08026
Symbol
bamD
Name
(GenBank) outer membrane protein assembly factor BamD
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
mvag
Microcoleus vaginatus
Brite
KEGG Orthology (KO) [BR:
mvag00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mvag01011
]
D0A34_14625 (bamD)
Enzymes [BR:
mvag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
D0A34_14625 (bamD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mvag01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
D0A34_14625 (bamD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_6
TPR_14
TPR_2
TPR_16
YfiO
TPR_19
Wzy_C_2
ANAPC3
TPR_4
ARM_TT21
Motif
Other DBs
NCBI-ProteinID:
UNU19949
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All DBs
Position
3625436..3627637
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AA seq
733 aa
AA seq
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MLKRRRARFSVLISVSVCVIAIGSLVAAMKWMGLGSFQKAEQPLEGANSESQVKMLVSLS
PSERSAKLVELAATQSASTNPQQQISPQSRARYLLASDLIQQGNAAKALNLLDKLEQEYP
VLAAHIALKRAEAYQLTGDKGKAQKAWQELLKNYPSDPVAAEALYVLGKSKPEYWQQAIT
EFPAHPRSVEIALRKLKENPNQPQLMLLVAKYGHYVKDYGTILEQLVQRNSATLKPEDWE
EIAFGYWEKQDYGKGAIAYGKAPRNAKNLYRKARGLWLDGKIPESRIAYQELVREFPDAE
DTGLGLIRLSRLSEPKEAIVLLDRVISKFPNYAPEALLDKSQLLDKARSGQSASDTRKLL
LTKYNNSDKAGELRWTIAQQFAKGGDLKSAWQWARELTTHNPDSEQAPEAAFWVGKWAQQ
LGREQDAKTAFDYTILRYPESYFAWRSAVLLGWPVGDFTTVRDLSPNVVRPPQRPELTAG
SPTLKELYQLGQDRDAWTLWQIEFIDRVEPSIAEQFTDGLMRVAVGDNLDGLWMVGSLRQ
RDKPDDRTQYLELRQQPIYWQALYPFPYLETIVKWSQERKINPVLVTALIRQESRFMPAI
KSSVGATGLMQVMPETAAWVAAQISLKKYSLENVDDNVKLGTWYLDHTHDEYKNNSMLAV
ASYNAGPTAVSDWLKRFNFSDPDAFAEKIPFPETKGYVKSVFENYWNYLRIYNPEVNQLM
SEHYAAAQKKAKP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaagacgccgggcccgattttctgttttaatcagcgtttcagtttgcgttatt
gcgatcggctctttggttgctgcgatgaaatggatgggtttgggctcattccagaaggcc
gagcagcccctggaaggagcgaattccgaatcgcaagtcaagatgctggtgtcgctgtca
ccgagtgagcgatcggcaaaattagttgaactcgcagctactcagtctgcaagtacaaac
ccgcagcagcaaatctcccctcaaagccgcgcccgctacctgcttgccagcgatttaatc
cagcaaggaaatgccgccaaagcattaaacttattggacaaattagagcaagaatatccg
gttttagctgctcacattgccctaaaaagagcggaagcctaccaattgactggcgacaaa
ggcaaagcccaaaaagcttggcaggaactgctcaaaaactatccgagcgacccggtagca
gcggaagctttatatgttttaggcaagtcaaaaccggaatattggcaacaggcaattact
gaatttcccgctcatccccgcagcgtagaaattgccctccgcaagttaaaagaaaatccc
aatcagccgcagttgatgctgctcgtagcaaaatacggtcattatgtcaaagactacggg
acaattttggaacaactggtgcagcgaaacagcgccactttaaaaccggaagattgggaa
gaaattgcctttggctattgggaaaaacaagattatggcaaaggagctattgcttacggg
aaagctccccgcaacgccaaaaatctttaccgaaaagctcgcggtttgtggctcgacgga
aaaatcccggaatcgagaattgcctatcaagaattagtgcgggagtttcccgatgccgaa
gatactggtttgggtttaattcggctatcgcggctgagcgaaccgaaagaagcgatcgtt
ttgctcgatcgagttattagcaaattccccaattatgcccccgaagctttgttagataaa
tcccaacttctcgacaaagcacgcagcggtcaatccgcctcagatacccgcaagttgcta
ttgacaaaatacaacaattctgataaagcaggcgaattgcggtggacgatcgcccagcag
tttgccaaaggcggagatttaaaatcagcttggcagtgggcgagagaattaaccacccac
aatcccgacagcgaacaagctccagaagcagcattttgggtcgggaaatgggcacagcaa
ctcggccgcgaacaagacgccaagactgcatttgactacacgatcttacgctatccagaa
tcatattttgcgtggcgatcggctgtacttcttggctggccagtcggagactttaccaca
gtccgagatttgtctcccaatgtagtgcgaccgcctcagcgccccgaactaactgcgggt
tctcctacgttgaaagaactctatcaattaggtcaagatagagatgcttggacgctgtgg
caaatagaatttatcgaccgcgtagaaccaagtattgccgaacagtttaccgacggttta
atgcgagttgcagtcggagacaatttagacggtttgtggatggttggtagtttgcgacag
cgcgataaaccagatgatagaacccaatacctggaactcagacagcaaccgatttattgg
caagcactttatccttttccttacttagaaaccattgtcaaatggtcccaagaacgcaaa
ataaatcctgtattagtaacagcattaatccggcaagaatcgcggtttatgcccgcaatc
aaatcatcagttggcgccactggtttaatgcaagtaatgccagaaacagcagcttgggtt
gccgctcaaatcagcctcaaaaagtattcattggagaatgtggacgacaacgttaaactc
ggtacgtggtatttggatcacactcacgacgagtacaagaataactcgatgttagctgtg
gcgagttataatgccgggccaaccgcagtatcagattggttgaagaggtttaattttagt
gacccggatgcttttgcggaaaagattccgtttcctgaaacgaaaggatacgtaaaatcg
gtgtttgagaattactggaattatctgcggatttacaatccagaagttaatcagttaatg
agtgagcattatgcggctgctcagaaaaaagcaaagccttag
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