Microcoleus vaginatus: D0A34_15180
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Entry
D0A34_15180 CDS
T08026
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mvag
Microcoleus vaginatus
Pathway
mvag03410
Base excision repair
mvag03430
Mismatch repair
mvag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D0A34_15180 (recJ)
03430 Mismatch repair
D0A34_15180 (recJ)
03440 Homologous recombination
D0A34_15180 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvag03400
]
D0A34_15180 (recJ)
DNA repair and recombination proteins [BR:
mvag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
D0A34_15180 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D0A34_15180 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D0A34_15180 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
UNU20040
LinkDB
All DBs
Position
complement(3732619..3734715)
Genome browser
AA seq
698 aa
AA seq
DB search
MQEIPTSVPPHFHRLPNQRWQIYSPQPQQAEQFAAEIGLSPLLAQVLINRGIDSLKEVQG
FIEPESLVLPAPNDEFPDLAASVKLLREAISGGQKIAICGDYDADGMTSTALLLRALRAL
GANVDYAIPSRMREGYGINDRIVEEFHSEGVALILTVDNGIAAYGPVARARELGVKVIIT
DHHDLPPKLPPADAILNPKLIAESSPYRGLAGVGVAYVLAITLAIDMQKLGGLVNPLLEL
FTLGTIADLAPLTGVNRRWVKRGLRLLPHSQLAGIQALIQVAGVQPGSAESPSILNSQNK
TNNSLKPEDIGFRLGPRINAVGRLADPQIVIELLTTDDRELALKNAMQCEQINQRRQELC
QEIEQEAIAWCEESELDLQQERVLVVVQPGWHHGVIGIVASRLVERYGVPVFIGTFEDEA
GENEAVGAVAHKIIRGSARGIPEFNVFDGLNFCADLLTKFGGHKAAGGFSMPAQNLEEFR
NQLSIFANQCLQPEHLKPLVAVDVRADLAEINLDLYRQIDALEPCGIENKAPVFWTPNVC
ITEQKIVGKGGHVKLTATQDGKASASVKAIAWRWGEYFPLPRRVDIAYRLRENSFNGKTS
VELELLGVRLPANAATSRPPRLGKVEFDYCDRTYSCSLSPAGSIEELRIRNSQGQVLAVS
PGQNIGLLGNSRKDAREVDVSLPFFENLIQTAKHALGI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagagataccgacatctgtgcctccgcattttcaccgattgccaaaccaacggtgg
caaatttattcgcctcaaccacagcaagccgaacagtttgccgcagaaatcggtttgtcg
cccttgctggcacaggtactgattaaccggggcatcgattctctgaaagaagtgcaaggg
tttatcgaaccggaatctctggttttgcccgcgccaaacgatgagtttccagatttggct
gcgagtgtcaaattgttgcgggaggcgatttcgggagggcaaaaaattgcgatttgcggc
gactacgatgcggacgggatgacgagcaccgctttgttgctgcgagctctgagggctctg
ggggcgaatgtggattatgctattcccagccggatgcgagaaggttatgggattaacgat
cgcattgtagaagaatttcactcggaaggtgtcgctctcattctcacggttgacaacgga
attgcagcctacggcccggttgccagagcgcgagaactcggtgtcaaagttattattaca
gaccaccacgatttgccaccaaaactgccgcctgctgatgctattctcaacccgaaatta
atcgcggaatcttcaccttatcgcggtttggcgggcgtaggcgttgcttatgttttggcg
attactttggcaattgatatgcagaaacttggcgggttggtgaatccgctgctggagtta
tttactttaggaactattgcggatttagcgcctttgacaggagttaatcggcgctgggtg
aagcggggtttgcggctgttgcctcactcgcaattggcgggtattcaggctttgattcag
gtggcgggagtgcagccgggaagtgcggaaagtccctcaattctcaactcgcaaaataaa
actaataattccttaaagcctgaagatattggttttaggctcgggcccaggattaatgct
gtggggcggctggctgaccctcaaattgtgatagagttgctgactacggacgatcgcgaa
ttggctcttaaaaacgcgatgcagtgcgaacaaattaatcagcgcaggcaggagttgtgc
caggaaattgagcaggaagccatcgcttggtgcgaggaaagtgagctcgacttgcagcaa
gaacgagttttagttgtcgtgcaaccgggttggcaccacggggtgatcgggattgtagct
tctcggttggtggaacgctacggcgtacctgtgtttattggtacttttgaggatgaggct
ggcgaaaacgaggctgtaggggcggttgcccataaaattatcaggggttcggcgagggga
attcctgagtttaatgtatttgacgggctgaatttttgcgcggatttattaactaaattt
ggcggacacaaagcggctggcggtttttctatgccggctcagaatctcgaagaattccgc
aatcaactgtcaatttttgccaatcaatgtttgcagccggaacacctaaaaccgctggtt
gcagttgacgtgcgagcagatttggctgaaattaatctcgacctttaccgacaaattgat
gctctggaaccttgcgggattgaaaataaggctcctgtcttttggacgcctaatgtttgc
ataactgaacagaaaattgttggtaaaggaggtcacgttaaactaactgcaactcaagat
ggaaaagcatcggctagtgtgaaggcgattgcttggcgttggggggaatattttcctttg
cctcggcgggttgatattgcttaccgattgcgggaaaatagttttaatgggaagacatca
gtggagttagaattgttgggtgtccggctgcccgcaaatgctgctacttccaggccaccg
aggttgggaaaagttgagtttgattactgcgatcgcacttattcttgcagtctatctccc
gccgggtcgatcgaggaattgagaattcgcaactctcaaggccaagttctggctgtttca
cccggacaaaacatcggtttgttaggtaactcccgcaaagatgctagagaagtcgatgta
tctctacctttttttgagaatttgattcaaactgctaaacacgccctgggtatttga
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