Microcoleus vaginatus: D0A34_15965
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Entry
D0A34_15965 CDS
T08026
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mvag
Microcoleus vaginatus
Brite
KEGG Orthology (KO) [BR:
mvag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvag03016
]
D0A34_15965 (truB)
Enzymes [BR:
mvag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D0A34_15965 (truB)
Transfer RNA biogenesis [BR:
mvag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D0A34_15965 (truB)
Prokaryotic type
D0A34_15965 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UNU20176
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All DBs
Position
3922716..3923657
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AA seq
313 aa
AA seq
DB search
MTTDGFLNLNKPAGMTSHDCVGRVRRLLKLKRVGHGGTLDPAVTGVLPIALGKATRLLQY
LQHNKAYRGTIRFGLTTATDDLEGEIIHSRPVPELSLEKVQAALPKFLGKIEQFPPSFSA
VQVGGKRLYELARKGETVEVAARKVEVFRLEILDWRSGDFPELDLSIACGAGTYIRAIAR
DLGAVLNAGGTLACLTRTESSGFSIEESLSFEQLELQLQENKFCPILPSAVLGHLGAIVL
SPEYTKRWFQGQRLPIPETPIGGEEESSNNPFYNPIPQHPYPLQVYDRDGNFLGIGQVAN
SETSTILSPQIVL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgactactgacggttttctcaatctcaacaaacctgccggcatgacatctcacgactgc
gtggggcgagtgcgccggctattgaaactcaagcgagtcggacacggaggaaccctcgat
cctgctgtgactggcgttttaccgatcgccctgggcaaagcaaccagactgctgcaatat
ctccaacacaataaagcttaccgaggcacgattcggtttggcttaactaccgctactgac
gatttagaaggagaaattatccattctcgaccggtgccagagttgagtttggaaaaagtg
caagctgcactgccaaaattcctaggaaaaatcgagcaatttccgccaagttttagtgcg
gtgcaggtgggaggaaaacgcctttatgagttagctagaaaaggggaaactgtggaagtt
gctgctaggaaggtggaggttttccggctagaaatcttggattggcgatcgggggatttt
cctgaattggatttgtcgatcgcctgcggggcaggtacttacattcgggcgatcgcgcgg
gatttgggcgcggtgttgaatgcaggcggtactttggcttgtttgactcgtaccgaaagt
agcggtttttcgatcgaggaaagtctcagttttgaacaattggaactgcaattgcaggag
aataaattctgcccgattttgccatcagcggttttgggacatttaggggcgatcgtcctt
tcacctgaatataccaaacgctggtttcaaggacagcgcctcccaattcccgaaacgccg
atcgggggagaggaagaaagtagcaacaatcccttttacaacccaataccccaacatccc
tatccgttacaggtttacgatcgagacggtaattttttaggtatcggtcaagtagcgaac
tcagagacaagtaccatattatctcctcaaattgtgctttaa
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