Microcoleus vaginatus: D0A34_25255
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Entry
D0A34_25255 CDS
T08026
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mvag
Microcoleus vaginatus
Pathway
mvag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mvag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D0A34_25255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvag03021
]
D0A34_25255
03400 DNA repair and recombination proteins [BR:
mvag03400
]
D0A34_25255
Enzymes [BR:
mvag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D0A34_25255
Transcription machinery [BR:
mvag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D0A34_25255
DNA repair and recombination proteins [BR:
mvag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D0A34_25255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
UNU21708
LinkDB
All DBs
Position
6104775..6106649
Genome browser
AA seq
624 aa
AA seq
DB search
MAKIEQRFDYVKIGLASPERIRQWGERTLPNGQITGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVAHVWYLKGI
PSYMAILLDMPLRDVEQIVYFNAYVVLNPGNAEKLQYKQLLTEDAWLEIEDELYSEDSTL
TGVEVGIGAEALQVLLQNIPLESEAEKLREDIANAKGQKRAKLIKRLRVIDNFIATGSQP
DWMVLNVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIIRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPKLKIHQCGLPREMAIELFQPFVIHRLIRQGLVNNIKAAKKLIQRNDPSVWDVLQE
VIEGHPVMLNRAPTLHRLGIQAFEPILVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLSL
ESQAEARLLMLASNNIMSPATGRPIVTPSQDMVLGCYYLTAENPDAQKGAGHYFSNLTDA
VVAYEQGVVDLHSYVWVRFQGAIENTEPEGEPLKVERSTDGIVTKEYKFRRVREDGDGKV
INQFIRTTPGRIIYHQTIESVINN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaatagaacaacgctttgattacgtcaagatcgggttagcttcaccagaaaga
attcgacagtggggagagagaactttacccaacggtcagattactggagaagtgacaaaa
ccagaaacaataaattatcggacgttaaaaccagaaatggatggcttgttttgcgagcgc
atttttgggccggcaaaagattgggaatgtcattgtggcaagtacaaacgagttcgccat
agaggcattgtttgcgaaagatgcggtgttgaagtcactgaatctcgcgtccgccgtcac
cggatgggatttatcaaattagcagccccagtagctcacgtttggtatctcaaaggcatc
ccgagttacatggcaattttattagatatgcccctgcgagatgtcgaacaaatcgtctat
ttcaatgcctatgttgttctcaatcccggtaatgccgaaaaactgcaatacaagcaattg
ctaaccgaagatgcttggttggaaatagaagacgaactttacagcgaagattccacgctg
acgggtgtagaagtaggcataggtgctgaagctttgcaagttttgctgcaaaacattccg
ctagaaagcgaagcggaaaagttgcgggaagatattgccaatgctaaaggtcaaaaacgg
gcgaagttaattaaacgtttgcgggtaattgacaacttcatcgctacgggatctcaaccc
gattggatggtgctcaatgtgattccggtgattccccccgacttgcggccgatggtgcag
ctagacggcgggcgttttgcaacgagcgacctcaacgacctttaccggagagtaatcaac
cgcaacaaccgcttggcgagactccaagaaattttggcgccggagattatcatccgcaac
gaaaagcggatgctgcaagaagctgtggatgcgctgattgacaacggccgccggggccgg
acggtggtgggggcaaacaaccgcccgctgaagtcgctgtcggacatcattgaagggaaa
caaggtcgtttccggcaaaacttgctggggaaacgggttgactactccgggcgttcggtg
attgtggtggggccgaaactgaaaattcatcagtgcggtttgccgagggaaatggcgatc
gagcttttccagcctttcgtcatccaccgcttgatccgccaaggattggtcaacaacatc
aaagctgccaaaaaactgatccagcgcaacgatcccagtgtttgggacgtgcttcaggag
gtgattgaaggacacccggtaatgctaaaccgggcgccgaccctccaccgtttggggatt
caagcctttgagccgattttggtggacgggagggcaattcagcttcacccgctagtctgt
ccggcttttaacgctgactttgacggcgaccaaatggcagtgcacgtgcctttgtctctg
gaatctcaggcggaagcgcgcttgctgatgctggcttctaacaacattatgtcgccggca
accggaagaccgatcgttactccttctcaagatatggtgctcggttgctattacttgaca
gccgaaaatcctgacgctcaaaaaggagctggtcactatttttccaaccttaccgacgcg
gttgtagcttacgaacaaggagtcgttgacttgcactcatacgtgtgggtgaggtttcaa
ggcgccatagaaaacacagaacccgaaggagaaccgctgaaggtggaacgctctaccgac
ggtatcgtgacgaaagaatacaagttccgccgggttcgggaagacggagacggcaaggtg
atcaatcaattcattcgcactactccgggcaggattatctatcaccaaaccatcgaatcg
gtcattaacaattag
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