Microcoleus vaginatus: D0A34_25865
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Entry
D0A34_25865 CDS
T08026
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mvag
Microcoleus vaginatus
Pathway
mvag03420
Nucleotide excision repair
mvag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mvag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D0A34_25865
03430 Mismatch repair
D0A34_25865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvag03400
]
D0A34_25865
Enzymes [BR:
mvag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D0A34_25865
DNA repair and recombination proteins [BR:
mvag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D0A34_25865
MMR (mismatch excision repair)
Other MMR factors
D0A34_25865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UNU21813
LinkDB
All DBs
Position
complement(6256295..6258757)
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AA seq
820 aa
AA seq
DB search
MTDEFDTDFMRSTTQIDRPDVASTLSESGFAAVLREQACLKIRESLRAGQQDMADWQGGP
LAVSAVPGAGKSTGMAAASAIAIARNGLHSRRQLIVVTFTRSAAANIKAKIRERLTELSL
SQGGFAVHTLHGLALNIAMRHPDLSGLNLENSTLVTPTQSHRLIRTCVELWIAENPRRYQ
VLLEGQQFDGEETERLRRQSVLRTEILPQVAKTVIHEAKSSGLFPEQLLEMNALDTGDGY
EILAVAGGLYQKYQALLRSREYIDYDEMILAALRVLDNPRARAIEQKQVFAVFEDEAQDS
TPLQTRLLETLAIDPEHPNSPPNFIRVGDPNQAINSTFTPADPIYFNQFCDRCEVENKLA
TMDGAGRSTQVIINAANFMLQWVNSSKLAGTEQPFRDQTIKPVPSDDPQQNANPAPIGRG
LELHTPRDIYHTIELIGKRVIELVEEFLPADFEFGRDGKDIDAGEEASEGENSAKLPLEN
LKSMAILVRENKQGKFIKEVLENPQKHGLSFDLRKYGIKIEDVGERDRHSQVPWEILTLL
QFLDRPHSPDYLKAALKILSDRQLIPKQDYNAFATSPEQFLYPGPLDPQQSDPVRKCRYF
CCGLLQASLELPPYQIISFLALALQYDQTELATADKLAERVAIQTAGNNSMRNILDVLSE
IVSSERFEPVDADDKIEERYTSKGQLTIITMHKAKGLDWDCVFLPFLHEQTIPGNLRVLP
QTRFLGDFTLAEVARAQIRASLHEKYPLPNLGEAWEQAGYLKTAEEFRLLYVAMTRAKSL
LWMAAEKKGPFTWNKPENLQEQKPCPVMPVLKQRFPSNAI
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgaatttgatactgattttatgcgatcgacaacccagatcgatcgcccggat
gtagcctcaacgctttcagaatcagggtttgccgccgttttgcgagaacaagcttgcctt
aaaattcgcgaaagcttgcgtgcggggcagcaggacatggcggattggcaaggcggcccc
cttgctgtttcggcggttccaggggccgggaagtctacgggaatggctgctgcgtcggca
attgcgatcgcccgcaacgggcttcacagtcgccgccagttaattgtcgtgacatttacg
cgatcggctgctgctaatattaaagctaaaattcgggaaagattgacagaattgtcttta
tctcaaggcggttttgcggtgcacactttgcacggtttagctttgaatattgcgatgcgc
catcccgatttgtctggtttaaatttagaaaattcaaccttagttactcctactcaaagt
caccgattaattcgcacctgtgtagaactttggattgccgaaaatccccgccgatatcaa
gttttgctggaaggacagcaattcgacggagaggaaacggagaggctgcggcgacaatcg
gttttgcggacagaaattttgccgcaggtagctaaaactgtgattcacgaggcgaaatct
tctggtttatttcccgaacagttgttagaaatgaacgctcttgatactggggacggttat
gaaattttagcagtagctgggggtttatatcaaaaatatcaggctttgttgaggagtcgg
gaatacatcgattacgacgaaatgattttagccgctttgcgggtgttggacaatccgagg
gcgagggcgatcgagcaaaagcaagtatttgctgttttcgaggacgaagcgcaggattct
acacctttgcagactcggcttttggaaacattggcgatcgatcccgaacatcctaactca
cctcccaattttatcagagttggcgatccaaatcaagcgattaattctaccttcactccc
gcagatccgatttattttaaccaattttgcgatcggtgcgaagtagaaaataagttagcg
accatggacggcgcaggccgtagcacccaggtaattatcaatgcagctaactttatgttg
caatgggtaaatagctcaaaattagcgggaaccgaacagccttttcgcgaccaaactatt
aagccagtacccagcgatgacccgcagcaaaatgcaaatcctgcccccattggtcgaggc
ttagaattacatactccccgcgatatttaccatacaattgagttaattggcaagcgggta
attgagttagtagaggaatttttaccagccgattttgaatttggcagggatggcaaggat
atcgatgcaggggaagaagcgagcgagggggaaaatagcgccaaattgccgttagaaaat
ctgaaatcgatggctattttggtgcgggaaaacaaacaaggtaagtttataaaagaagtg
ctggaaaatcctcaaaaacacggattaagctttgatttgcggaaatacgggattaaaatt
gaggatgtgggagagcgggacagacattctcaagtaccttgggaaatcttaacactgctg
caattcctcgatcgcccgcactctccagactacctaaaagcagccttaaagattttgagc
gatcggcaactgatccccaaacaagactacaatgcttttgcgactagccccgagcaattt
ctttacccaggcccgctagacccgcagcagtcagaccccgttcgcaaatgtcgctatttt
tgctgcggtttgctgcaagctagcttggaattgccaccctatcaaatcatttcattctta
gccttagcgctgcaatacgaccaaacagaattagccaccgccgacaaattagccgaacgg
gtagcaatccaaacagccggcaacaattcaatgcggaatattttggatgtactgagcgaa
attgtcagttccgaaagatttgaacctgtggatgcagacgacaaaatagaagaacgctat
accagcaaaggtcaactaacaattattaccatgcacaaagctaaaggattggattgggat
tgcgtatttttgccgtttctgcacgaacaaaccatccccggaaatttgcgagttttgcca
caaacccgatttttaggagatttcactttagcagaggtagcaagagcacaaattcgagca
agtttgcacgaaaaatatcctttaccaaatctaggcgaagcctgggaacaagcaggttat
ttgaaaacagcagaagagtttcgactgctgtatgtggcgatgaccagagcaaaaagcttg
ctgtggatggccgcggagaagaaagggccttttacttggaacaaaccagagaatctgcag
gagcaaaaaccttgtccggtaatgcctgttttgaagcagagatttccgagtaatgccata
taa
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