Massilia varians: MasN3_04990
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Entry
MasN3_04990 CDS
T08769
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mvar
Massilia varians
Pathway
mvar00300
Lysine biosynthesis
mvar00470
D-Amino acid metabolism
mvar01100
Metabolic pathways
mvar01110
Biosynthesis of secondary metabolites
mvar01120
Microbial metabolism in diverse environments
mvar01230
Biosynthesis of amino acids
Module
mvar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MasN3_04990 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MasN3_04990 (dapF)
Enzymes [BR:
mvar01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MasN3_04990 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
BDT57005
UniProt:
A0ABN6T7D7
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All DBs
Position
complement(539380..540231)
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AA seq
283 aa
AA seq
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MKLKFTKMHGAGNDFIVVDAIHQDVNLSTEQWRRLADRRFGIGADQILVVERPVSAGVDF
RYRIFNSDGGEVEQCGNGARAFARFVSDKALSSEKSIRVETMKGIIAPRLEEDGSVTVDM
GAPQLDPAEVPFDAAGLDGRAEGEDITWPLAVDGETVFVSVVSMGNPHAVQVVENVDSAP
VDTMGPAIETHARFPRKVNAGFMQVVDRRHVRLRVFERGAGETLACGTGACAAVVAGIRR
GLLDSPVRVSARGGELSIAWAGVGQPVYLSGPAVTVFEGEVDV
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaattcaccaagatgcacggcgcgggcaacgatttcatcgtcgtcgacgct
atccaccaggatgtcaacctgagcaccgaacaatggcgccgcctggccgaccgccgcttc
ggcatcggggccgaccagatcctggtggtggagcgcccggtgagcgcgggcgtcgatttc
cgctaccgcatcttcaacagcgatggcggcgaggttgaacagtgcggcaacggcgcgcgc
gccttcgcccgcttcgtcagcgacaaggcgctgtcaagcgagaagagcatccgtgtggag
accatgaagggcatcatcgccccgcgcctggaagaagacggcagcgtgacggtggacatg
ggcgcgccccagctggatccggccgaggtgcccttcgatgcggcgggcctggacggccgc
gccgagggcgaagacatcacctggccgctggcggtggacggcgagaccgtgttcgtgtcg
gtggtctcgatgggcaatccgcatgcggtgcaggtggtcgagaacgtcgacagcgcgccg
gtggacaccatgggtccggcgatcgaaacccatgcgcgcttccccaggaaggtgaatgcc
ggcttcatgcaggtggtggaccgccgccacgtcaggctgcgcgtgttcgaacgcggcgcc
ggcgagaccctggcctgcggcaccggggcctgcgcggccgtggtggccggtatccgccgc
ggcctgctcgattcgccggtgcgcgtgtcggcgcgcggcggcgagctcagcatcgcatgg
gcgggggtggggcagccggtgtatctgagcggtccggcagtgaccgtgttcgagggtgaa
gtcgacgtctga
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