KEGG   Massilia varians: MasN3_04990
Entry
MasN3_04990       CDS       T08769                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
mvar  Massilia varians
Pathway
mvar00300  Lysine biosynthesis
mvar00470  D-Amino acid metabolism
mvar01100  Metabolic pathways
mvar01110  Biosynthesis of secondary metabolites
mvar01120  Microbial metabolism in diverse environments
mvar01230  Biosynthesis of amino acids
Module
mvar_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:mvar00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    MasN3_04990 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    MasN3_04990 (dapF)
Enzymes [BR:mvar01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     MasN3_04990 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: BDT57005
UniProt: A0ABN6T7D7
LinkDB
Position
complement(539380..540231)
AA seq 283 aa
MKLKFTKMHGAGNDFIVVDAIHQDVNLSTEQWRRLADRRFGIGADQILVVERPVSAGVDF
RYRIFNSDGGEVEQCGNGARAFARFVSDKALSSEKSIRVETMKGIIAPRLEEDGSVTVDM
GAPQLDPAEVPFDAAGLDGRAEGEDITWPLAVDGETVFVSVVSMGNPHAVQVVENVDSAP
VDTMGPAIETHARFPRKVNAGFMQVVDRRHVRLRVFERGAGETLACGTGACAAVVAGIRR
GLLDSPVRVSARGGELSIAWAGVGQPVYLSGPAVTVFEGEVDV
NT seq 852 nt   +upstreamnt  +downstreamnt
atgaaactgaaattcaccaagatgcacggcgcgggcaacgatttcatcgtcgtcgacgct
atccaccaggatgtcaacctgagcaccgaacaatggcgccgcctggccgaccgccgcttc
ggcatcggggccgaccagatcctggtggtggagcgcccggtgagcgcgggcgtcgatttc
cgctaccgcatcttcaacagcgatggcggcgaggttgaacagtgcggcaacggcgcgcgc
gccttcgcccgcttcgtcagcgacaaggcgctgtcaagcgagaagagcatccgtgtggag
accatgaagggcatcatcgccccgcgcctggaagaagacggcagcgtgacggtggacatg
ggcgcgccccagctggatccggccgaggtgcccttcgatgcggcgggcctggacggccgc
gccgagggcgaagacatcacctggccgctggcggtggacggcgagaccgtgttcgtgtcg
gtggtctcgatgggcaatccgcatgcggtgcaggtggtcgagaacgtcgacagcgcgccg
gtggacaccatgggtccggcgatcgaaacccatgcgcgcttccccaggaaggtgaatgcc
ggcttcatgcaggtggtggaccgccgccacgtcaggctgcgcgtgttcgaacgcggcgcc
ggcgagaccctggcctgcggcaccggggcctgcgcggccgtggtggccggtatccgccgc
ggcctgctcgattcgccggtgcgcgtgtcggcgcgcggcggcgagctcagcatcgcatgg
gcgggggtggggcagccggtgtatctgagcggtccggcagtgaccgtgttcgagggtgaa
gtcgacgtctga

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