Massilia varians: MasN3_06910
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Entry
MasN3_06910 CDS
T08769
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mvar
Massilia varians
Pathway
mvar00300
Lysine biosynthesis
mvar00470
D-Amino acid metabolism
mvar01100
Metabolic pathways
mvar01110
Biosynthesis of secondary metabolites
mvar01120
Microbial metabolism in diverse environments
mvar01230
Biosynthesis of amino acids
Module
mvar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MasN3_06910 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MasN3_06910 (lysA)
Enzymes [BR:
mvar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MasN3_06910 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BDT57197
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All DBs
Position
complement(763525..764802)
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AA seq
425 aa
AA seq
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MSHFQYQNGVLHADSVALPAIAEQFGTPTYVYSKSALLENFSAYSDACRGRDALVCYAMK
ANSNLAILDLLARAGAGFDIVSGGELLRVIAAGGDPGKTIFSGVGKTVEEMQLALEKGIL
CFNVESIPELHRLNDVAGSMGKRAPVSLRVNPNVDAKTHPYIATGLKANKFGVAFDDALA
TYRTAASLPNLDVVGIDCHIGSQLLDDAPLLEALDKLIELIDTLALEGIHVHHLDIGGGL
GVNYGAEGDKPPVPVGDYLGRLFARIDAWRAEKYEGKPVKVIFEPGRSIVADTGVLLTKI
EYLKPGVEKNFAIVDAAMNDLMRPTLYQAWMGVQPVSPREGAKLTYDVVGPVCESGDWLA
RERELAVEPGDLLAIMTAGAYGMTMASNYNTRGRAAEVIVDGDRVHVIRQRENPADLFAL
ESMLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttccagtaccagaacggcgtcctgcacgccgacagcgttgccctgcccgcc
atcgccgaacaattcggcacgcccacctatgtctattccaagtcggcgctgctggagaat
ttcagcgcctactccgatgcctgccgcggccgcgacgcactggtgtgctacgcgatgaag
gccaactcgaacctggccatcctggacctgctggcgcgcgccggcgccggcttcgacatc
gtctcgggcggcgaactgctgcgcgtgatcgccgccggcggcgatccgggcaagaccatc
ttctcgggcgtcggcaagaccgtcgaggaaatgcagctggcactggaaaaaggcatcctg
tgcttcaacgtcgagtcgatcccggaactgcaccgcctcaacgacgtggccggcagcatg
ggcaagcgcgcgccggtgtcgctgcgcgtgaacccgaacgtggacgccaagacccatccc
tacatcgccaccggcctgaaggccaacaagttcggcgtcgctttcgacgatgcgctggcc
acctaccgcaccgcggcctcgctgccgaacctggacgtggtcggcatcgactgccacatc
ggctcgcagttgctggacgacgcacctctcttggaagcgctggacaagctgatcgagctg
atcgacaccctggcgctcgagggcatccatgtgcaccacctcgacatcggcggcggcctg
ggcgtgaactacggcgccgagggcgacaagccgccggttccggtgggcgactacctgggc
cgcctgttcgcccgcatcgacgcctggcgcgccgagaaatacgagggcaagccggtcaag
gtgatcttcgagccgggccgctcgatcgtggccgataccggcgtgctgctgacgaagatc
gaatacctcaagccgggcgtggagaagaatttcgccatcgtcgacgcggccatgaacgac
ctgatgcgcccgaccctgtaccaggcctggatgggcgtgcagccggtcagcccgcgcgaa
ggcgccaagctgacctatgacgtggtgggtccggtgtgcgaatcgggcgactggctggcg
cgcgagcgcgaacttgccgtcgagccgggcgacctgctggcaatcatgaccgccggcgcc
tatggcatgacgatggcctcgaactacaacacccgcggccgcgcggccgaggtgatcgtg
gacggcgaccgggtgcacgtgattcgccagcgcgagaatccggccgatctgtttgcgctg
gaatcgatgctgaagtag
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