Massilia varians: MasN3_08690
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Entry
MasN3_08690 CDS
T08769
Name
(GenBank) endonuclease
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
mvar
Massilia varians
Pathway
mvar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MasN3_08690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvar03400
]
MasN3_08690
Enzymes [BR:
mvar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MasN3_08690
DNA repair and recombination proteins [BR:
mvar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MasN3_08690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
PknG_rubred
DpnI
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
BDT57375
LinkDB
All DBs
Position
complement(952223..952963)
Genome browser
AA seq
246 aa
AA seq
DB search
MPEGPSLYILKELVRDFTGQEIVRADGNVRAIDPARLVGQRIEAIHTWGKHLLIETPGMV
VRVHFLLFGTYRINERREEKTPRLSIETANGDELNLYACQVREIDRATFAAYDFSADVMS
DAWDPRKARKKLRARPDMLACDALLDQDIFSGVGNIIKNEVLFRIRVHPLSTIGALPAPK
LRLLVDEARQYSFDFLEWKRQYVLKQHWLAHAKRICPRCDIPFLKAKLGRSNRRSFYCER
CQKRYS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagggaccgtcgctatatatcttgaaggaactggttagggatttcaccggccag
gaaatcgtccgtgccgacggcaacgtccgcgccatcgaccctgcgcgcctggtgggccag
cgcatcgaggcgatccacacctggggcaagcacctgctgatcgagacacccggcatggta
gtgcgcgtccacttcctgctgttcggcacctaccgcatcaacgagcggcgcgaggagaag
accccgcgcctgtccatcgaaaccgccaatggcgacgagctcaacctctatgcctgccag
gtccgcgagatcgaccgcgcgacctttgccgcttacgacttcagtgccgacgtcatgtcg
gacgcctgggaccccaggaaagcgcgcaagaagctgcgcgcccggcccgacatgctggcc
tgcgacgccctgctcgaccaggacatcttttccggcgtcggcaacatcatcaagaacgaa
gtgctgtttcgcatccgcgtgcatccgctgtcgaccatcggcgccctgcccgcgcccaag
ctgcgcctgctggtcgacgaggcccgccaatactcattcgacttcctggaatggaagcgc
caatacgtgctcaagcagcactggctggcgcatgcaaaacgcatctgcccgcgttgcgac
atccccttcctgaaagccaagctcggccgcagcaaccggcgcagcttctactgcgaacgc
tgccagaaacgctacagctag
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