Massilia varians: MasN3_10840
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Entry
MasN3_10840 CDS
T08769
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mvar
Massilia varians
Pathway
mvar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MasN3_10840 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvar03400
]
MasN3_10840 (ruvB)
Enzymes [BR:
mvar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MasN3_10840 (ruvB)
DNA repair and recombination proteins [BR:
mvar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MasN3_10840 (ruvB)
RecFOR pathway proteins
MasN3_10840 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_3
AAA_22
Rad17
AAA_14
nSTAND3
DUF815
AAA_18
AAA_2
AAA_17
RNA_helicase
TsaE
ABC_tran
NTPase_1
TniB
AAA_33
AAA_28
bpMoxR
AAA_25
NB-ARC
AAA_24
NACHT
Motif
Other DBs
NCBI-ProteinID:
BDT57590
LinkDB
All DBs
Position
1199334..1200401
Genome browser
AA seq
355 aa
AA seq
DB search
MSIQTDNFTEQRVIDAAPASPNEEAIERALRPKQLDEYVGQAKIRDQLEIFISAARKRRE
ALDHTLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERPGDLAALLTNLEPNDVLFID
EIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRD
RFGIVARLEFYNVDELTKIVARSAALLEAPINEAGAREVAKRARGTPRIANRLLRRVRDY
AEVKGTGEITVEMADRALKMLDVDTVGFDVMDRKLLEAVLFKFAGGPVGIGNLAAAIGEA
ADTIEDVLEPYLIQQGYLQRTPRGRIATPLAYQHFGVTAPRISPTGDLWDNLPPA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccagaccgacaacttcaccgagcagcgcgtgatcgacgcggcgccggcctcg
cccaacgaggaggcgatcgagcgcgccttgcgtcccaagcagctcgacgagtacgtcggc
caggccaagatccgcgaccagctcgagatttttatttccgccgcgcgcaagcgccgcgaa
gcgctcgaccacacgctgctgttcggaccgccgggcctcggcaagaccacgctggcgcac
atcatcgcgcgcgagatgggggtgaacctgcgccagacttcaggccccgtgctggagcgc
cccggcgacctggccgcgctgctgaccaacctcgagccgaacgacgtgctcttcatcgac
gagatccaccgcctgtcgccggtggtcgaggagatcctgtacccggcgctcgaggactac
cagatcgacatcatgatcggcgagggcccggccgcgcgttccgtgaagctcgacctgcag
cccttcaccctggtcggcgccaccacccgcgccggcatgctgaccaacccgctgcgcgac
cgcttcggcatcgtggcgcgcctcgagttctacaacgtcgacgaactcaccaagatcgtc
gcccgcagcgccgcgctgctcgaggccccgatcaacgaagcgggtgcgcgcgaggtcgcc
aagcgcgcgcgcggcacgccgcgtatcgccaaccgcctcctgcgccgcgtgcgcgactat
gcggaagtgaagggtaccggcgagatcaccgtcgagatggccgaccgcgcgctcaagatg
ctcgacgtcgacacggtcggcttcgacgtcatggaccgtaaactgctggaggcggtgctg
ttcaagttcgccggcggcccggtcggcatcggcaacctggcggcggcgatcggcgaggcg
gccgacaccatcgaggacgtgctcgaaccctacctgatccagcagggctacctgcagcgc
accccgcgtggacgcatcgccacgccgctggcctaccagcacttcggcgtcaccgcgccg
cgcatcagcccgacgggcgacctgtgggacaatctgccgcccgcctga
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