Massilia varians: MasN3_11160
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Entry
MasN3_11160 CDS
T08769
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mvar
Massilia varians
Pathway
mvar03420
Nucleotide excision repair
mvar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MasN3_11160
03430 Mismatch repair
MasN3_11160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mvar03400
]
MasN3_11160
Enzymes [BR:
mvar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MasN3_11160
DNA repair and recombination proteins [BR:
mvar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MasN3_11160
MMR (mismatch excision repair)
Other MMR factors
MasN3_11160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BDT57622
LinkDB
All DBs
Position
1232421..1234733
Genome browser
AA seq
770 aa
AA seq
DB search
MQNLLHNLNPEQLAAVTLPSQSALILAGAGSGKTRVLTTRIAWLIQTGQVSPAGIMAVTF
TNKAAKEMLTRLSSMLPINTRGMWIGTFHGLCNRLLRTHYKDAALPQAFQILDSQDQLSL
IKRMLKAHNVDDEKYPAKALMYFINNAKEQGLRANRLEPNDPIERRMIELYELYEGQCQR
EGVVDFAELLLRSYELLARNGPLRHHYQMRFRHILVDEFQDTNDLQYNLLKLLAGHDEEG
GGAIFAVGDDDQSIYAFRGANVGNMQAFEREFRVKNLIKLEQNYRSFGHILDSANYLIAN
NTKRLGKNLRTDAGQGEQVRVYEAASDLEEAQWIIEEAKSLMKDGLSRSEIAILYRSNAQ
SRVIEHALFAAGLPYTVYGGLRYFQRAEVKHAIAYLQLMDNPHNDSAFLRVVNFPTRGIG
ARSIEQLQMAADTYGISLYAAVPYMTGKAGSALGNFVKLIESARFETQQLPLPELVRVVL
ERSGLLLHYQNEKEGADRIENLEQMVGAATQFVQEEGYGQAAPAHLGPQALPATGEAIVN
QDGIEVLDADAPLASVMSPLSAFLTHASLEAGDAQAQAGQDALQLMTVHSAKGLEFDAVF
ITGLEEGLFPHESSARELDGVDEERRLMYVAITRARKRLYMSFTQQRMLHGQTRFNMKSR
FFDELPEESIKWLSPRVQTNWFAGRKQTTAWDDAAFRDGSDNKIAQQITQKSGNGSGWRV
GESVSHAKFGEGVIVNIEGGAGAARAQINFGAAGMKVLDLSVAKLERVGR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatctcctccataacctcaatcccgaacagctcgccgccgtcaccctgccgtcg
cagagcgcgctgatcctggccggcgccggttccggcaagacgcgcgtgctgacgacccgc
atcgcctggctgatccagaccgggcaggtgtcgcccgccggcatcatggcggtgaccttc
accaacaaggcggccaaggagatgctgacgcgcctgtcctccatgctgccgattaatacg
cgcggcatgtggatcggcaccttccacggcctgtgcaaccggctgctgcgcacccactac
aaggacgccgcgctgccgcaagccttccagatcctcgattctcaggaccagctctcgctg
atcaagcgcatgctgaaggcgcacaacgtggacgatgaaaaatatccggccaaggcgctg
atgtacttcatcaacaacgccaaggagcagggcctgcgcgcgaatcgcctggagccgaac
gacccgatcgagcgccgcatgatcgagctctacgagctgtacgagggccagtgccagcgc
gagggcgtggtcgatttcgccgagctgctgctgcgctcgtacgagctgctggcccgcaat
ggccccttgcgccaccactaccagatgcgcttccgccacatcctggtcgacgagttccag
gataccaacgacctgcagtacaacttgttgaaactgctggccgggcatgacgaggagggc
ggcggcgccatcttcgccgtgggcgacgacgaccagagcatctacgccttccgtggcgcc
aacgtcggcaacatgcaggccttcgagcgcgaattccgcgtcaagaacctgatcaagctg
gagcagaactaccgctccttcggccacatcctcgacagcgccaactacctgatcgccaac
aacaccaagcgtctcgggaagaacctgcgtaccgatgcggggcagggcgagcaggtgcgt
gtgtacgaagcggccagcgacctcgaagaagcgcaatggatcatcgaggaagccaagagc
ctgatgaaggacggcctgtcgcgcagcgagatcgcgatcctgtaccgctccaacgcgcag
agccgcgtgatcgagcacgcgctgttcgcggccgggctgccctataccgtgtacggcggc
ctgcgctacttccagcgcgccgaggtcaagcacgccatcgcctacctgcagctgatggac
aacccgcacaacgattcggctttcctgcgcgtggtgaacttccccacccgcggcatcggc
gcgcgctcgatcgaacagctgcagatggcggccgacacctatggcatctcgctgtacgcg
gcggtgccctacatgaccggcaaggccggcagcgcgctcggcaacttcgtgaagctgatc
gaatcggcgcgtttcgagacccagcagctgccgctgccggaactggtgcgcgtggtgctg
gagcgcagcggcctgctgctgcactaccagaacgagaaggaaggcgccgaccgcatcgag
aacctggagcagatggtgggcgccgccacccagttcgtgcaggaagaaggctacggccag
gccgccccggcccacctgggcccgcaggcgctgcccgcgacgggcgaagccatcgtcaac
caggacggcatcgaggtcctcgacgccgacgccccgctggccagcgtgatgtcgccgctg
tcggccttcctcacccacgcttcgctggaagcgggcgacgcccaggcccaggccgggcag
gatgcgctacagctcatgacggtgcactcggccaagggcctggaattcgacgcggtcttc
atcaccggcctggaagaaggcctgttcccgcacgagagcagcgcgcgcgaactcgatggc
gtggacgaggaacggcgcctgatgtacgtggcgatcacgcgcgcgcgcaagcgtttgtac
atgagctttacccagcaacgcatgctgcacggccagacccgcttcaacatgaagtcgcgc
ttcttcgacgaactgccggaagagtcgatcaagtggctgtcgccgcgcgtgcagaccaac
tggttcgccggccgcaagcagaccacggcctgggacgacgccgccttccgcgacggttcc
gacaacaagatcgcgcagcagatcacgcagaagtccggcaacggctccggctggcgcgtg
ggagagagcgtctcccacgccaagttcggcgagggcgtgatcgtcaatatcgagggtggg
gcgggcgcggcgcgcgcccagatcaacttcggcgcggcggggatgaaggtgctggacctg
tcggtggcgaagctggagcgcgtcggccgctga
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integrated database retrieval system
