KEGG   Massilia varians: MasN3_12190
Entry
MasN3_12190       CDS       T08769                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
mvar  Massilia varians
Brite
KEGG Orthology (KO) [BR:mvar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mvar03021]
    MasN3_12190 (rpoH)
Transcription machinery [BR:mvar03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MasN3_12190 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 UCR_14kD
Other DBs
NCBI-ProteinID: BDT57725
LinkDB
Position
complement(1336019..1336909)
AA seq 296 aa
MSAQSALVPAGSRALGLGFSGNLGNIDAYISAVNRLPMLTHEEEVSLAKSLREKNDLDAA
QKLVLSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPNQGVRLVSYAMHWIK
AEMHEYILKNWRLVKVATTKAQRKLFFNLRSNKQGLDTMTPSQVDELAKMLDVKREEVIE
METRLSGRDIALESPTDDEDDKFAPIAYLSSEQQEPTRVLEAEQRDRLQSEGLETALSKL
DPRSRRIVEARWLANDDGSGATLHTLAEEFGVSAERIRQIESAALKKMKGALTAYL
NT seq 891 nt   +upstreamnt  +downstreamnt
atgtccgcacaatccgcattggttccggccggcagtcgtgctctgggactgggtttctct
ggcaatctgggcaacatcgatgcctacatttctgccgtcaaccgcctgccgatgctgact
cacgaggaagaggtatcgctggcgaagtcgctgcgcgaaaagaacgacctcgacgccgcg
cagaagctggtgctctcgcacctgcgcctggtcgtgtcgatcgcgcgtggctacctcggc
tatggtctgccgcacgccgacctgatccaggaaggcaatatcggcctcatgaaagcggtc
aagcgcttcgacccgaaccagggcgtgcgtctcgtttcgtacgcgatgcactggatcaag
gccgagatgcacgaatacatcctgaagaactggcgcctggtgaaggtcgcgacgaccaag
gcccagcgcaagctgttcttcaacctgcgcagcaacaagcagggtctggacaccatgacc
ccgagccaggtcgacgagctggcgaagatgctcgacgtcaagcgcgaagaagtgatcgag
atggaaacccgcttgtcgggccgcgacatcgccctcgaatcgccgaccgacgacgaagac
gacaagttcgccccgatcgcctacctgtcgtcggagcagcaggagccgacccgcgtgctg
gaggccgagcagcgcgaccgcctgcagtccgaaggcctggagaccgccctgtcgaagctg
gacccgcgttcgcgccgcatcgtcgaagcgcgctggctggccaacgacgacggctcgggc
gccacgctacacacgctggccgaagagttcggcgtgtcggccgagcgtatccgccagatc
gaatcggctgcgctgaagaaaatgaaaggtgcgctgacggcttacctctaa

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