Massilia varians: MasN3_12370
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Entry
MasN3_12370 CDS
T08769
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mvar
Massilia varians
Pathway
mvar00470
D-Amino acid metabolism
mvar00550
Peptidoglycan biosynthesis
mvar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MasN3_12370 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MasN3_12370 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mvar01011
]
MasN3_12370 (murD)
Enzymes [BR:
mvar01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
MasN3_12370 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mvar01011
]
Precursor biosynthesis
Amino acid ligase
MasN3_12370 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
2-Hacid_dh_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
BDT57743
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All DBs
Position
1356692..1358191
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AA seq
499 aa
AA seq
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MNYEGKSALVLGLGESGLAMAQWLARCGARVRVADTRTEPQRLFALRQAVPNAEFVAGEF
GETLLGGMDFVAVSPGLAPQRELAQLAPAARARGIPLWGEIELFAQALAHLRLARAYTPK
VIAITGTNGKTTVTSLTGLLCRRAGLSTRVAGNISPAALDVLRECLDGDDLPQAWVLELS
SFQLHTTFSLQADAATVLNLTQDHLDWHGSMDAYAADKARIFGADTVRVLNRNDAIVMRM
QAVDTPATTFGTDEPSDPNSFGLVNERGVLWLANAVALDDEPPRKLKKGEVAPPLEVSVN
RLMPADALKIRGLHNAANALAALALCRACGLPLAPLLHGLREYAGEPHRVELVAHIDGVD
FYDDSKGTNVGATVAALEGLGKAFAGDDQQIVLIAGGDGKGQDFAPLAGPSSRYVRAVLL
IGRDAPSVRAAIEPTGVPVFDLPGLPEAVRRAAGLARPGDSVLLSPACASLDMFTNYAHR
AQVFVDAVREIALEKGQEI
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgaaggcaaatccgcactggtgctgggcctgggtgaatccgggctggcgatg
gcgcaatggctggcacgttgcggcgcgcgcgtgcgcgtggccgacacgcgcaccgagccg
cagcgcctgttcgccctgcgccaggcggtgccgaacgcggaattcgtcgccggagaattc
ggcgagaccctgctgggcggcatggacttcgtggccgtcagcccgggcctggcgccgcag
cgcgaactcgcgcagctggcgccggccgcgcgtgcccgcggcatcccgctgtggggcgag
atcgaactgttcgcgcaggcgctcgcacacctgcgattagcgcgtgcgtacaccccgaaa
gtcatcgccatcaccggcaccaacggcaagaccacggtgaccagcctgaccggcctgctg
tgccgccgcgccggcctgtcgacccgcgtggccggcaacatcagcccggcggcgctcgac
gtgctgcgcgaatgcctggacggtgacgacctgccgcaggcctgggtgctcgagctgtcg
agcttccagctgcataccaccttcagcctgcaggccgatgcggccacggtgctgaacctg
acccaggaccacctcgactggcatggcagcatggacgcctatgccgcggacaaggcgcgc
attttcggcgccgataccgtgcgcgtgctgaaccgcaacgacgccatcgtgatgcgcatg
caggcggtcgacacgccggccacgaccttcggtaccgacgaaccgtcggatccgaacagc
ttcggcctggtcaacgaacgcggcgtgctgtggctcgccaatgccgtcgcgctcgacgac
gaaccgccgagaaagctgaagaagggcgaagttgccccgccgctggaagtgagcgtgaac
cgcctgatgccggccgacgcgctcaagatccgcggcctgcacaatgccgcgaacgcgctg
gccgcgctggccctgtgccgcgcctgcggcctgccgctggccccgctgctgcacggcctg
cgcgaatatgcgggcgaaccgcaccgcgtggaactggtcgcgcatatcgacggcgtcgat
ttctacgacgacagcaagggcaccaacgtgggcgccaccgtcgccgcgctggaaggcctg
ggcaaggccttcgccggcgacgaccagcagatcgtcctgatcgccggcggcgacggcaag
ggccaggatttcgctcctctcgccggcccaagctcgcgttatgtgcgcgccgtgctcctg
atcggccgcgatgccccgagcgtgcgcgcggcgatcgagccgaccggcgtgccggtcttc
gatctgcccggcctgccggaagcggtgcgccgcgccgccggcctggcgcgcccgggcgat
agcgtgctgctgtcgccggcctgcgccagcctcgacatgttcaccaactacgcgcaccgc
gcccaggtcttcgtcgacgccgtgcgcgagatcgcgctggagaaggggcaggagatctga
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