Massilia varians: MasN3_12740
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Entry
MasN3_12740 CDS
T08769
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
mvar
Massilia varians
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mvar03000
]
MasN3_12740
Transcription factors [BR:
mvar03000
]
Prokaryotic type
Helix-turn-helix
LysR family
MasN3_12740
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
MarR_2
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BDT57780
UniProt:
A0ABN6TA18
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Position
1392495..1393394
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AA seq
299 aa
AA seq
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MINYKHLHYFHAVATHGTVARAAEQLHVTAQAISMQLQVLEEQLGEELFKKKGRVLELTE
AGKTVLRYAEQIFDLGNELEQAVRRGAFTGDETLRVGICDVIAKPMAFRLLQPAREVGLA
MRLICREGRFDDLVVDLAAHKLDLVIADQGLPTGGAVRGYTQRLGSSTLTVFGHPELCRA
WPGEFPQRLRNAPFLLPGQDAAVHTQLKSWFERHDLRPITVGEFDDGALLKSFASAGTGF
MAAPTVLSSIVQLETGLVEVGTIDSIVEHFYAVSVERREGHPAVRRILEGAGAVFGHGA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgatcaactacaagcacctgcattacttccacgcggtcgccacccatggcacggtggcg
cgcgcggccgagcagctgcacgtgacggcgcaggcgatcagcatgcagctgcaggtgctg
gaagagcagctgggcgaggaactgttcaagaagaaggggcgggtgctggagctcaccgag
gccggcaagaccgtgctgcgctacgccgagcagatcttcgacctcggcaacgagctggag
caggcagtgcggcgcggcgcctttacgggcgatgaaaccctgcgggtcggcatctgcgac
gtgatcgccaagccgatggccttccgcctgctgcagcctgcgcgcgaagtcggcctggcg
atgcgcctgatctgccgcgaagggcgcttcgacgacctggtggtcgatctcgccgcccat
aagctcgatctggtgatcgccgaccagggcctgcccaccggcggcgcggtgcgcggctac
acccagcggctggggtcgagcacgctcaccgtgttcggccacccggagctatgccgggca
tggccgggcgagttcccgcagcgcctgcgcaacgcgcccttcctgctgcccggccaggac
gctgccgtccacacccagctcaagagctggttcgagcgccacgacctgcgtccgatcacg
gtgggcgaattcgacgacggcgcgctgctgaagtccttcgcctctgccggtaccggcttc
atggcggcgcccacggtgctctcgagcatcgtgcagctcgaaaccgggctggtggaagtc
ggcaccatcgacagcatcgtcgagcatttttatgccgtgtcggtggagaggagggaaggg
catccggcggtgcggcggatcctggaaggggcgggggcggtgttcgggcacggggcctga
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