Massilia varians: MasN3_14040
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Entry
MasN3_14040 CDS
T08769
Symbol
gsiA
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
mvar
Massilia varians
Pathway
mvar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MasN3_14040 (gsiA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mvar02000
]
MasN3_14040 (gsiA)
Transporters [BR:
mvar02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MasN3_14040 (gsiA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
oligo_HPY
AAA_21
AAA_22
AAA_29
TniB
ABC_ATPase
nSTAND1
AAA_16
nSTAND3
AAA_13
ATP-synt_ab
PRK
Motif
Other DBs
NCBI-ProteinID:
BDT57910
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Position
1554172..1555860
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AA seq
562 aa
AA seq
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MDDHDPLLRVRDLRIAFRVDKNNTVEAVKGISFDVPRNSTVALVGESGSGKSVSSLAVMG
LLPPNTTVIGPGSRAHFDGRELLALAPAERRALCGKDIAMIFQEPMSSLNPVFTVGYQIG
EVLRRHLGMNAKQARARTLALLEEVGIPDHAVKIDAYPSQMSGGQQQRVMIAMAIACEPR
LLIADEPTTALDVTIQKQIIDLIRRLQKKHQMSVLFITHDLALVGEIADRVIVMRHGEVR
EEGQAAQVFGAPRDAYTRALLHCRPKLDERPLRLPVIDDYLSGRTSPEQALPQRTRGTAP
DDAPVLVVKNLAKSFWLRDGLFRKREFKAVKDVSFTLARGKTLGVVGESGSGKTTVGLTL
LRLHRATGGSAMFDGQDLFSMPERDYQAYKRRIQIIFQNPYASLNPRFTVGQILLEPMRI
HRIGLDDGERIGMAHELLRRVGLPEQAFHRYPHEFSGGQRQRIAIARCLTMKPEIVVCDE
SVSALDVSVQAQVLNLLQDLQDEYGMSYIFISHDLSVVKYIADQVMVMHHGSVVEMADSD
ALYRNPQHDYTRSLLAAIPRGT
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccacgatcccctgttgcgggtgcgcgacctgcgcatcgccttccgcgtcgac
aagaacaacacggtcgaggcggtcaagggcatttccttcgacgtgccgcgcaacagcacg
gtggcgctggtgggcgaatccggcagcggcaagtcggtcagttcgctggccgtgatgggc
ctgctgccgccaaacaccaccgttatcggccccggctcgcgcgcgcacttcgacggccgc
gagctgcttgcgctcgcgcctgcggagcgccgggcgctatgcggcaaggacatcgcgatg
atcttccaggagccgatgtcctcgctcaacccggtgttcacggtgggctaccagatcggc
gaagtgctgcgccggcacctgggcatgaacgcgaagcaggcgcgcgcccgcacgctcgcc
ttgctggaagaggtcggcattcccgaccatgcggtcaagatcgatgcctacccgagccag
atgtcgggcggccagcagcagcgcgtgatgatcgcgatggcgatcgcctgcgagcccagg
ctcctgatcgcggacgagccgaccacggcgctcgacgtgaccatccagaagcagatcatc
gatctgatccggcgcctgcaaaagaaacaccagatgtcggtgctgttcattacccacgac
cttgctctggtgggcgagatcgccgaccgcgtgatcgtcatgcgccacggcgaggtgcgc
gaagaagggcaggcggcccaggtgttcggcgccccgcgcgacgcttatacgcgcgcgctc
ctgcattgccggccgaagctggacgagcgtccgctgcgcctgccggtcatcgacgactat
ctgagcggccggaccagcccggaacaagcactgccccagcgtacgcgcggcacggcgccg
gacgacgcgccggtgctggtggtgaagaacctcgccaagagcttctggctgcgcgacggc
ctgttcaggaagcgcgagttcaaggcggtcaaggatgtgtcgttcaccctggcgcgcggc
aagaccctgggcgtggtgggcgaatccggctcgggcaagaccacggtcggcctgaccctg
ctgcgcctgcaccgcgccaccggcggcagcgccatgttcgacggccaggacctgttcagc
atgccggagcgcgactaccaggcctacaagcggcgcatccagatcatcttccagaatccg
tatgcctcgctgaatccgcgcttcacggtggggcagattctgctggaaccgatgcgcatc
caccggatcggcctggacgacggcgagcggatcggcatggcgcatgagctcctgaggcgg
gtgggcctgccggaacaggccttccaccgctacccgcacgagttctccggcggccagcgc
cagcgcatcgccatcgcgcgctgcctgaccatgaagccggagatcgtggtgtgcgacgaa
tcggtgtcagcgctcgacgtgtcggtgcaggcccaggtgctgaatctgctgcaggacctg
caggacgagtacggcatgagctacatcttcatctcgcacgatttgtcggtggtgaagtac
attgccgaccaggtgatggtgatgcaccacggcagcgtggtcgagatggcggattcggac
gctttgtaccgcaatccgcagcacgactacacgcgcagcctgctggcggcgattccacgg
ggtacgtag
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