Massilia varians: MasN3_14130
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Entry
MasN3_14130 CDS
T08769
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mvar
Massilia varians
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mvar03016
]
MasN3_14130 (truB)
Enzymes [BR:
mvar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MasN3_14130 (truB)
Transfer RNA biogenesis [BR:
mvar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MasN3_14130 (truB)
Prokaryotic type
MasN3_14130 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TcfC
Motif
Other DBs
NCBI-ProteinID:
BDT57919
LinkDB
All DBs
Position
1567019..1567939
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AA seq
306 aa
AA seq
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MAARPPKKPRDLVDGVLLLDKPVGLSSNDALMKAKRVFNAKKAGHTGTLDPFATGLLPLC
FGEATKFSQDLLEADKTYEATVHLGIMTTTGDTEGELIEQREVDVTREQVEAALARFRGP
IFQVPPMYSALKRDGKALYEYAREGITLEREARPVTIHALSLVEYTAPLLKILVTCSKGT
YVRVLGEDIGAALGCGAHLNALRRVQVGALSTERMITLEDLQAHADPLSLLAPVDALLSS
FPSVELTAELAKRFLNGQRLALGKESVVVPSELGRVRVYHDGKLLGTASLQEYAILAPER
LIAAQQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcccgtcctcccaaaaaaccgcgcgacctcgtcgacggcgtcctcctgctcgac
aagccggtcggcctgtcctcgaacgacgccctgatgaaggccaagcgcgtcttcaatgcc
aaaaaggccggccataccggcaccctggacccgttcgccaccggcttgctgccgctgtgc
ttcggcgaagcgaccaagttctcgcaagacctgctcgaagccgacaagacctatgaggcg
acggttcacctgggcatcatgaccaccactggcgacaccgaaggggagctcatcgagcag
cgcgaggtggatgtcacgcgcgagcaggtcgaagccgccttggcgcgctttcgcggtccc
atcttccaggtcccgcccatgtattccgcgctcaagcgcgacggcaaggcgctgtacgag
tacgcgcgcgaaggcatcacgctcgagcgcgaagcgcggccggtgaccatccacgccttg
tccctggtcgagtatacggcgccgctcctgaagatcctggtcacctgcagcaagggcacg
tatgtgcgcgtgctgggcgaggacatcggcgccgcgctcggctgcggcgcgcacctgaac
gcgctgcgccgggtgcaggtgggggcgctctccaccgagcgcatgatcacgctggaggac
ctgcaggcgcacgccgatccgctctcgctgctggccccggtcgatgcattgctgtcgagc
ttcccgtcggtcgagctcacggcggagctggcaaagcgtttcctgaacggccagcgcctg
gcgctcggcaaggaatcggtcgtcgtccccagcgaattgggccgggtgcgggtctaccat
gacggcaagctgctcggcaccgccagcttgcaggaatacgccatcctggcgccggagcgc
ctgatcgcggcgcagcagtaa
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