Massilia varians: MasN3_16270
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Entry
MasN3_16270 CDS
T08769
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
mvar
Massilia varians
Pathway
mvar03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
MasN3_16270 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
mvar03011
]
MasN3_16270 (rpsA)
Ribosome [BR:
mvar03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
MasN3_16270 (rpsA)
Bacteria
MasN3_16270 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
BDT58133
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Position
1799401..1801107
Genome browser
AA seq
568 aa
AA seq
DB search
MSTATNQDTGMESFAALFEESLSRQDMRSGEVISAEVVRLDHNFVIVNAGLKSEAFIPVD
EFKNDQGELEVQIGDFVSVAIESLENGFGDTILSRDKAKRLASWLALEKAMESGEIVTGT
VNGKVKGGLTVLTNGIRAFLPGSLVDTRPVKDTTPFEGKTLEFKVIKLDRKRNNVVLSRR
AVIEASMGEERAKLMETLKEGTVVTGVVKNITDYGAFVDLGGIDGLLHITDLAWRRVRHP
SEVLSVGQEITAKVLKYDQEKNRVSLGVKQLGDDPWTGLSRRYPQGTRLFGKVTNLTDYG
AFVEVEQGIEGLVHVSEMDWTNKNVAPNKVVQLGDEVEVMVLEIDEERRRISLGMKQCKA
NPWDDFGMTHKKGDKVKGSIKSITDFGVFIGLPGNIDGLVHLSDLSWTEAGEEAVRKFKK
GDELEAVVLAIDVERERVSLGVKQLEGDPFNNFASLNDKGTLVTGTVKSVEPKGAVIALN
DEVEGYLRASEISRDRVEDAGTHLKVGDKVEALVINIDRKARSIQLSIKAKDSADTQEAM
NKLAADNSAASGTTSLGALLKAKFDNKG
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgcaaccaatcaagataccggcatggaaagcttcgccgcccttttcgaagaa
tcgctgtcgcgtcaagacatgcgttcgggcgaagtcatctcggctgaagtcgtgcgcctg
gatcacaacttcgtgatcgtcaacgccggcctgaagtcggaagccttcattccggtcgac
gaattcaagaatgaccagggcgaactggaagtccagatcggcgacttcgtttccgtggcc
atcgaatcgctcgaaaacggtttcggcgataccatcctgtcgcgcgacaaggccaagcgc
ctggcatcgtggctggctctggaaaaagcaatggagtcgggcgagatcgtcaccggcacc
gtcaacggtaaagtcaaaggcggcctgaccgtcctgaccaacggcatccgcgcattcctg
ccgggttcgctggtcgacacccgtccggtcaaggacaccaccccgttcgaaggcaagacc
ctggaattcaaggtcatcaagctggaccgcaagcgtaacaacgtcgtcctgtcgcgtcgc
gccgtcatcgaagcatcgatgggcgaagagcgcgccaagctgatggaaaccctgaaagaa
ggcaccgtggtcaccggcgtcgtcaagaacatcaccgactacggtgcgttcgtcgacctg
ggcggcatcgacggcctgctgcacatcaccgacctggcatggcgtcgcgtgcgtcacccg
tcggaagtgctgtcggttggccaggaaatcaccgccaaggtcctcaagtacgaccaggaa
aagaaccgcgtttcgctgggcgtcaagcagctgggcgacgatccgtggaccggtctgtcg
cgtcgctacccgcagggcacccgtctgttcggcaaggtcaccaacctgaccgactacggc
gcgttcgtggaagtcgagcagggcatcgaaggcctggtgcacgtctcggaaatggactgg
accaacaagaacgtggctccgaacaaggttgtccagctgggcgacgaagtcgaagtcatg
gtcctggaaatcgacgaagagcgtcgtcgtatctcgctgggcatgaagcagtgcaaggcg
aatccgtgggacgacttcggcatgacccacaagaagggcgacaaggtcaagggttcgatc
aagtcgatcaccgacttcggcgtgttcatcggcctgccgggcaacatcgacggcctggtg
cacctgtcggacctgtcctggaccgaagccggcgaagaagccgtgcgcaagttcaagaag
ggcgacgagctggaagccgtcgtgctggccatcgacgtcgagcgcgagcgtgtctcgctg
ggcgtcaagcagctggaaggcgacccgttcaacaacttcgcttcgctgaacgacaagggc
accctggtcaccggcaccgtgaagtcggttgagccgaaaggcgccgtgatcgcgctgaac
gacgaagtcgaaggctacctgcgcgcttcggaaatctcgcgtgaccgcgtggaagacgcc
ggcacccacctgaaagtgggcgacaaggtcgaagccctggtcatcaacatcgatcgcaag
gctcgcagcatccagctgtcgatcaaggcgaaagacagcgctgacacccaggaagcaatg
aacaagctggcagccgacaacagcgccgcttcgggcaccaccagcctgggcgcactgctg
aaggccaagttcgacaacaagggctaa
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