Massilia varians: MasN3_17410
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Entry
MasN3_17410 CDS
T08769
Symbol
icd2
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
mvar
Massilia varians
Pathway
mvar00020
Citrate cycle (TCA cycle)
mvar00480
Glutathione metabolism
mvar00720
Other carbon fixation pathways
mvar01100
Metabolic pathways
mvar01110
Biosynthesis of secondary metabolites
mvar01120
Microbial metabolism in diverse environments
mvar01200
Carbon metabolism
mvar01210
2-Oxocarboxylic acid metabolism
mvar01230
Biosynthesis of amino acids
mvar04146
Peroxisome
Module
mvar_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mvar_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
mvar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MasN3_17410 (icd2)
09102 Energy metabolism
00720 Other carbon fixation pathways
MasN3_17410 (icd2)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
MasN3_17410 (icd2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MasN3_17410 (icd2)
Enzymes [BR:
mvar01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
MasN3_17410 (icd2)
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GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
BDT58247
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Position
1929472..1931706
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AA seq
744 aa
AA seq
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MSSDPTIIYTLTDEAPLLATHAFLPVVSTFTKPAGIKVEQSDISVAARILAQFPENLTPE
QRVPDALSELGKKTLEPDANIIKLPNISASVGQLTAAIKELQAKGYNLPDYPADPKTDEE
RAIKARYAKCIGSSVNPVLREGNSDRRAPKAVKEYARKNPHSMGEWSQASRTHVSHMTHG
DFYHGEKSMTLDAARDVKMELVTKSGQTIVLKPKVALQAGEIIDSMFMSRKALLAFYEKQ
IEDAKNTGVLFSLHVKATMMKVSHPIVFGHCVRMFYKEAFEKHGALFDSLGINVNNGMAD
LYNKIADLPASQREEIERDLHACQEHRPALAMVDSAKGITNFHSPNDVIVDASMPAMIRA
GGKMYGADGRLKEVKAVIPESTFARIYQEVINFCKWHGAFDPRTMGTVPNVGLMAQQAEE
YGSHDKTFEIQEDGVANIVDLATGEVLLSQNVEQGDIWRMCQVKDAPIRDWVKLAVTRAR
NSGMPAVFWLDPYRPHENELIKKVKTYLKDHDTSGLDIQIMSQVRAMRYTLERVSRGLDT
ISVTGNILRDYLTDLFPILELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLVEENH
LRWDSLGEFLALAVSLEDLGLKTGNNKAKVLAKTLDTATGRLLDNRKGPSPKTGELDNRG
SQFYLSMYWAQELAAQTEDAELAAKFAPLAKQLAENEQKIVAELLEVQGKPVDIGGYYKA
DDAKVKAVMRPSATFNAALESFAA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgatccgaccatcatctacaccctgaccgacgaggccccgctgctggcgacc
cacgccttcctgcctgtcgtcagcaccttcaccaagccggcaggcatcaaggtcgagcag
agcgacatctcggtcgccgcccgtatcctggcgcagttcccggaaaacctgaccccggaa
cagcgcgtcccggacgccttgagcgagctgggcaagaagaccctggagccggacgcgaac
atcatcaagctgccgaacatctcggcctcggtgggccagctgaccgccgccatcaaggaa
ctgcaggccaagggctacaacctgccggactacccagccgacccgaagaccgacgaagag
cgggccatcaaggcccgctacgccaagtgcatcggctcgtcggtgaacccggtcctgcgc
gaaggtaactcggaccgccgcgcaccaaaagcggtcaaggaatacgcacgcaagaacccg
cactcgatgggcgaatggtcgcaggcatcgcgcacccacgtgtcgcacatgacccacggc
gacttctaccacggcgaaaagtcgatgaccctggacgccgcccgcgacgtcaagatggaa
ctggtcaccaagtcgggccagaccatcgtgctgaagccgaaggtcgcgctgcaggccggc
gagatcatcgactcgatgttcatgagccgcaaggccctgctggccttctacgagaagcag
atcgaagacgccaagaacaccggcgtgctgttctcgctgcacgtcaaggcgaccatgatg
aaggtctcgcacccgatcgtgttcggccactgcgtgcgcatgttctacaaggaagcgttc
gagaagcacggcgccctgttcgacagcctcggcatcaacgtcaacaacggcatggccgac
ctgtacaacaagatcgccgacctgccggcctcgcagcgcgaagagatcgagcgcgacctg
cacgcctgccaggaacaccgtccggcgctggccatggtcgactcggccaagggcatcacc
aacttccactcgccgaacgacgtgatcgtcgacgcatcgatgccggccatgatccgcgcc
ggcggcaagatgtacggcgccgacggccgcctgaaggaagtcaaggcggtgatcccggaa
tcgacttttgcgcgcatctaccaggaagtgatcaacttctgcaaatggcacggcgcattc
gacccgcgcaccatgggcaccgtcccgaacgtgggcctgatggcgcagcaggccgaggaa
tacggctcgcacgacaagaccttcgaaatccaggaagacggcgtggccaacatcgtcgac
ctcgccaccggcgaagtgctgctgtcgcagaacgtcgagcagggcgacatctggcgcatg
tgccaggtgaaggacgcgccgatccgcgactgggtcaagctggcggtcacccgcgcgcgc
aactcgggcatgccggccgtgttctggctggacccgtaccgtccgcacgagaacgagctg
atcaagaaggtcaagacctacctgaaggatcacgacaccagcggcctggacatccagatc
atgtcgcaggttcgtgccatgcgctacaccctggagcgcgtctcgcgcggcctggacacc
atctcggtgaccggcaacatcctgcgcgactacctgaccgacctgttcccgatcctggaa
ctgggcaccagcgccaagatgctgtcgatcgtcccgctgatggccggcggcggcatgtac
gaaaccggcgcgggcggctcggctcccaagcacgtgcagcagctggtggaagagaaccac
ctgcgctgggattcgctgggcgaattcctggcgctggccgtgtcgctggaagacctgggc
ctgaagaccggcaacaacaaagccaaggtgctggccaagaccctggacaccgccaccggc
cgcctgctggacaaccgcaagggcccgtcgccgaagaccggtgagctcgacaaccgcggc
agccagttctacctgtcgatgtactgggcgcaagaactggccgcgcagaccgaggatgcc
gaactggcagccaagtttgcgccgctggccaagcagctggcggagaacgagcagaagatc
gttgccgaactcttggaagtgcagggcaagccggtcgacatcggcggctactacaaggcc
gacgacgccaaggtgaaagccgtgatgcgtccgagcgcgaccttcaacgctgcgctggag
tcgttcgccgcctga
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